Stenotrophomonas sp. LM091: BIZ42_01075
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Entry
BIZ42_01075 CDS
T04630
Name
(GenBank) hemagglutinin
KO
K21449
trimeric autotransporter adhesin
Organism
slm
Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slm02000
]
BIZ42_01075
Transporters [BR:
slm02000
]
Other transporters
Pores ion channels [TC:
1
]
BIZ42_01075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_anchor
ESPR
YadA_head
Motif
Other DBs
NCBI-ProteinID:
AOX60917
UniProt:
A0A1D8Y5Q4
LinkDB
All DBs
Position
complement(251632..256215)
Genome browser
AA seq
1527 aa
AA seq
DB search
MNRIFRLVWSHRLNALVVVSEIATARGSLAAGPVMVHLKVPMSVLSLGLSLALCTGSAWA
GENQTLTDLQALAAKYTAPLPVKLDAEVALAAAARDRGTTPLLSVDANVNLNLGAQAAHG
RPALQVQTAAQLSAELPRRIAAPTAQVAALADLGLAGGTGNGAALNAHAAVDAVATLAPS
AAAVQVPVKADARLTAATEGRLAVRADANAAANVAVAAAPAPLKAALDTKVDAAAQARLA
AAEVQAKAALIAEATVTPDAPDAVQASLASNVAGGVRVDALGHVVDAADRNPKLVDAGVS
AVQTSSMALAPNGLGNALGGLLNGVGGAVGGLLDGVGTTVGAITTPVLGAVGAVTTPILG
TVFPAPTSLPPGSPKGPAPADPNAGLIIGTGGLVGSLSQLVGPTAQGLLGGDGYVRNGNL
AVSSANVMQTYSVTNVLGLPVVNLSPVGTLLDGLGNASTGGSSHLTLIGGVTSDSYIYNI
NNGDPNGLLGLVLPDGSPAWSNKCLNLLVASVDCWAVNAAQDYQVLVGDGAFANGSKEVV
IGANARHELPRQDANIAFPGAGLNDPTDPTGVPTADYAARMGHSVVVGDSAKGTANGQTI
LGAEATSTQANSVALGYRSAANRGAQASYSAYGLSAPQVSAGEVSVGFAGGERQISNVAA
GSAATDAVNVAQLQGAISQIDAVGTLAVTYDDDGAGGANYRRVTLGAGTGTSTIANLADG
AVNATSTEAVNGAQLFDTNSAIVDYFGGVTAFDPATGAWTAPSFQISTISSDGAVAQGVY
DNTSDAFSAVDGSLVNLNTQITDIRNGVGSRYLKINSTGAEAAAAGLDSIAVGMGASATA
ANSIAVGAGAVADRADTVSVGAAGAERQVVNVAAGTQATDAVNLGQLEASEQGALRYDLN
PDGSVNYASATLGNGGGATTLSNLAAGSVTAGSSEAINGAQLFAANQAVATHLGGGAALD
ATGMVSAPTYTINNVASDGQVTAGSYDNVGSAFDAVSTSLANVADQTDTVDRLAVKYDAD
ASGNATNTITLAGDASGAAVALTNLAEGRVLAGSQDAVNGNQLFQTNNALVGYFGGTTNF
DGNTGIWTAPTFRISSIATDGSVIANDYSDVTVAFSAVDASLTNLNTRIDQIQPGGNSQY
VQVNSTKGAATAGGADSIAIGPLASAAGSGSAAIGDGASASADNSVALGAGSVASVGAQA
GYTGAYGQTGASSSVGEVAVGSTGAERKVTHVADGSERYDAVNVGQLQNGVNYAINESKA
YTDTQINNINNGTSGMFQVNNSQNLAAPSASGDNAVAGGAGAAAAGDNATALGNGASAQG
SNSVALGAGSVANRANTVSVGSSGAERQIANVADGSDATDAVNVRQLQASQQGTIRYDSN
VNGTTNLNSVTLGSTATGPTTVRNVAAGTAGTDAVNVDQLRSGMAQTLDWSKAYTDERMD
SFDRNLQKTDNRASAGVASAMAVAALPQPYEAGRSMASLAAGSFNGESGVAVGISGVSEG
GRWIYKFSGSTNSRGDGGVAVGAGIQW
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtatctttcgattggtgtggagccaccggctgaatgccctggtggtcgtgtcc
gaaatcgccaccgctcgcggcagcctggccgccggaccggtgatggtgcacctgaaggtg
ccgatgtcggtgctctcgctgggtctgtcgctggcgctgtgcacgggcagtgcatgggca
ggcgagaaccagacactcaccgacctgcaggcactggccgccaagtacaccgcgccgttg
ccggtgaagctcgatgcagaagtggcgctggcggcggccgcacgtgatcgtggcaccacg
ccactgttgagcgtggatgccaacgtcaacctcaacctgggtgcacaggcggcccacggt
cggccggcactgcaggtgcagaccgccgcacagttgagtgcggagctgccccggcgcatc
gccgcgccaaccgcacaggtggcggcgttggccgacctgggtcttgcaggcggcaccggc
aacggagcagcactgaatgcacacgccgccgtcgacgccgtggccacgctggcaccgtcg
gcagcagcggtgcaggtgccggtcaaggcggatgcgcgactgactgccgccactgagggc
aggttggccgtgagggccgatgcaaacgcggcagcgaacgtggccgttgcggctgcgccg
gccccgctcaaggcggcgctggacaccaaggtcgatgcggctgcccaggcgcgccttgcc
gccgccgaggtgcaggccaaggcggcattgatcgccgaggccacggtcacgcctgatgcc
ccggacgcggtgcaggcgtcgctggccagcaatgtcgccggtggtgtgcgcgtggatgca
ctgggccacgtggtcgatgcggccgatcgcaatcccaagctggtcgatgccggcgtcagc
gccgtgcagaccagttcgatggcgctggcaccgaacgggctgggcaacgcactgggaggg
ttgttgaacggtgtcggtggtgcggtcggcggcctgcttgatggcgtcggcacgacggtg
ggggcgatcacgacgcccgtgctcggtgcggtcggcgcggtcaccacgccgatactgggt
accgtgttcccggcaccgacgtcgctgccgccgggcagcccgaagggaccggccccggcc
gatccgaacgccggcctgatcatcggtaccggtggcctggtgggctcgctatcgcagctg
gtcggccccaccgcgcagggtctgctgggtggcgacggctacgtgcgcaatggcaacctg
gcggtcagcagcgccaacgtgatgcagacctactcggtcaccaacgtgctgggcctgccg
gtggtcaacctgagcccggtcggcacgctgctcgatgggctgggcaacgccagcaccggg
ggcagctcgcacctgaccctgatcggcggcgtcacctccgacagctacatctacaacatc
aacaacggcgatcccaatggcctgctcggcctggtgttgccggacgggtcgccggcatgg
tcgaacaagtgcctcaacctgctggtggccagcgtggactgctgggcggtcaatgccgcg
caggattaccaagtgctggttggcgacggggcgtttgccaatggctccaaggaagtggtg
atcggcgccaacgcacgccatgagctgccgcggcaggacgccaacatcgcgttcccgggc
gccgggctcaacgatccgaccgaccccaccggcgtaccgaccgccgactacgccgcgcgc
atgggccactcggtggtcgtcggcgacagcgcgaagggcacggccaacggccagaccatc
ctcggtgcggaggccacctccacccaggccaacagcgttgcgttgggctaccgctccgcc
gccaaccgcggtgcgcaggccagctacagtgcctacgggctgagcgcgccgcaggtatcg
gcgggtgaagtctcggtcggcttcgccggtggcgagcgccagatcagcaacgtggccgcc
ggcagtgccgccaccgatgcggtcaacgtcgcccagctgcagggcgcgatctcgcagatc
gacgcggtcggcacgctggcggtgacctacgacgacgatggtgcaggcggtgccaactac
cgccgggtgacactgggcgccggcaccggcaccagcaccattgccaacctcgccgatggc
gcggtgaacgcgaccagcaccgaggcggtcaatggcgcccagctgttcgacaccaacagt
gcgatcgtggactacttcggcggcgtcaccgccttcgatcccgccaccggtgcgtggacc
gcaccgagcttccagatctccacgatctccagcgacggcgcagtggcccagggcgtgtac
gacaacaccagcgacgccttctccgccgtcgatggctcgctggtcaatctcaacacgcag
atcaccgacatccgcaacggggtcggcagccgctacctgaaaatcaattccaccggtgca
gaggccgccgctgccggcctggacagcatcgccgtcggtatgggggcctcggccacggcg
gccaacagcatcgccgtgggtgccggcgcggtggccgaccgcgcggacacggtctccgtc
ggtgcagccggcgcggagcgccaggtggtgaacgtggcggccggtacccaggccaccgat
gccgtcaatctgggccagctggaagcctccgaacagggcgcgctgcgttacgacctcaac
ccggatggcagcgtgaactacgccagcgccacgctggggaacggcggcggtgcgaccacg
ctgagcaacctcgccgctggcagcgtcacggccggcagcagcgaggcgatcaacggggcc
cagctgttcgccgccaaccaggccgtggccacccacctcggcggtggggcggcgctggac
gccaccggcatggtcagcgcgccgacctacacgatcaacaacgtcgccagcgatggccag
gtcaccgccggcagctatgacaacgtcggcagtgccttcgatgcggtcagcacctcgctg
gccaacgtcgccgaccagaccgacaccgtggaccgcctggcggtgaagtacgacgccgat
gccagcggcaatgccaccaacaccatcaccctggccggcgacgccagtggcgcggcggtc
gcactgaccaacctggccgagggtcgcgtgctggccggcagccaggatgcggtcaatggc
aaccagctgttccagaccaacaatgcgctggtggggtacttcggcggcaccaccaacttc
gacggcaacaccgggatctggacggcaccgaccttccgcatctcctccatcgccaccgac
ggcagtgtcatcgccaacgattacagcgatgtcaccgtggccttctcggcggtggatgcc
tcgctgaccaacctcaacacccgcatcgaccagatccagccgggtggcaacagccagtac
gtgcaggtgaactcgaccaagggcgcggccactgcgggcggtgccgacagcatcgcgatc
gggccgctggccagcgccgccggaagcggcagtgcggccatcggtgacggcgccagcgcc
agtgcggacaacagcgttgcgctcggcgccggctcggtcgccagcgtgggggcacaggcg
gggtacaccggtgcctacggccagaccggggcgagcagttcggtgggcgaagtggccgtc
ggcagtaccggggccgagcgcaaggtcacccatgtggccgatggttccgagcgctacgac
gcggtcaatgtcggccagctgcagaacggcgtgaactacgcgatcaacgagtccaaggcc
tacacggatacgcagatcaacaacatcaacaacggtacctccggcatgttccaggtcaac
aattcgcagaacctggctgcgccctcggcctccggcgacaacgccgtggccggtggtgcc
ggcgccgctgccgcgggcgacaacgccaccgcgctgggcaacggggccagtgcgcagggc
agcaacagtgtcgccctgggtgccggctcggtggccaaccgcgccaacacggtctcggtg
ggcagcagcggggcggagcgccagatcgccaacgtcgccgacggcagcgacgccaccgac
gcggtcaatgtccgccagctgcaggcctcgcagcagggcacgatccgttacgactccaac
gtcaacggcaccaccaacctcaacagcgtgaccctgggcagcaccgccaccggaccgacc
acggtgcgcaatgtcgccgccggtaccgccgggaccgacgcggtcaacgtggaccagctg
cgcagcggcatggcccagaccctggactggtccaaggcctataccgacgagcgcatggac
tcgttcgaccgcaatctgcagaagaccgacaaccgtgcctcggccggtgtggcctcggcg
atggcggtggcggcgctgccgcagccgtatgaggccggccgcagcatggcttcgctggcc
gcaggcagcttcaacggtgaatccggcgtggccgtgggcatctcgggggtctccgagggc
ggccgctggatctacaagttcagcggttcgaccaacagccgcggcgatggtggtgtcgcg
gtaggtgccggcatccagtggtga
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