Stenotrophomonas sp. LM091: BIZ42_04400
Help
Entry
BIZ42_04400 CDS
T04630
Name
(GenBank) ATP-dependent DNA ligase
Organism
slm
Stenotrophomonas sp. LM091
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
AOX61494
UniProt:
A0A1D8Y7E2
LinkDB
All DBs
Position
981900..983504
Genome browser
AA seq
534 aa
AA seq
DB search
MKRFAALYSELDRSTATGDKRAALVRYFQQAPAHDAAWALFLLAGGKVTSARQKIAGNAE
LRAWVAELSDAPAWLVDDSYDQVGDLAETLTLLMNDPAQAGADIGLADWIEQKLLPVANQ
PEPVRHAAVTGAWQQLAFDERLVFNKLLTGALRVGVSQRLVQQALAEWSGIDIARIAQRM
LGSWVPAPGLLAALLSPEERPEDRQQPYPFFLASPLEAEVDTLGPIDDWLLEWKWDGIRL
QVLRRQGEVALWSRGEERLDGRFPEIEAAAMALPDGCVIDGELLAWADGDDLPLPFTALQ
TRIQRLKPGPKTLRDTPVRVLAYDLLELGGEDLRALPLSQRRARLAEVLATLDDPRLRLS
PALSVADWHAAALQRDLARERGVEGLMLKRAESVYQAGRRRGDWWKWKIAPLTIDAVMIY
AQSGHGRRSTLYTDYTFGVWDGQTLVPVAKAYSGLDDKEILALDRWIRANTIERFGPVRS
VRGEQVFELGFEAVNRSKRHKSGIAVRFPRILRWRHDKPASEADTLAQLQALAR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgctttgccgcgctctacagcgagctggaccgcagcaccgcgaccggcgacaaa
cgcgccgcgctggtgcgctacttccagcaggcccccgcgcacgacgccgcatgggccctg
ttcctgctggccggcggcaaggtcaccagcgcgcgacagaagatcgccggcaacgccgag
ctgcgcgcgtgggtggccgagttgtccgatgcgcccgcctggctggtcgacgacagctat
gaccaggttggcgatctggccgagacgctgaccctgctcatgaatgatccggcgcaggcc
ggcgcggatatcgggctggccgactggatcgagcagaagctgctgccggtggccaatcag
cccgagccggtgcgtcatgccgccgtcaccggggcgtggcaacagctcgccttcgatgag
cggctggtgttcaacaagctgctgaccggcgcgctgcgggtgggcgtgtcacagcggctg
gtgcagcaggcgctggccgaatggtcgggcatcgacatcgcgcgcattgcccagcgcatg
ctcggcagctgggtgcccgcgccgggcctgctggccgccttgttgtcccccgaagagcgc
cccgaggatcgccagcagccctacccgttcttcctggcctcgccgttggaggcggaggtc
gacacgctgggcccgatcgacgactggctgctggaatggaagtgggatggcatccgcctg
caggtgctgcgccgccagggtgaggtcgcgctatggtcgcgtggcgaggagcggctggac
ggtcgcttccccgagatcgaggcggccgcgatggcgttgcccgatggctgcgtgatcgat
ggcgagctgctggcctgggcggacggcgacgatctgccgctgcccttcaccgccctgcag
acccgcatccagcgactcaagcccggcccgaagacactgcgcgatacgccggtgcgcgtg
cttgcctacgatctgctcgagctgggcggtgaagacctgcgcgccctgcccctctcgcaa
cggcgcgcgcgcctggccgaggtactggccacgctggacgacccgcgcctgcggctgtca
ccggcgctcagcgtggcggactggcacgcggcggcactgcagcgtgacctggcccgcgag
cgtggcgtggaagggctgatgctcaagcgcgccgagtcggtttaccaggccgggcgccgg
cgcggcgactggtggaagtggaagatcgcgccgctgaccatcgatgcggtgatgatctac
gcccagtccggccatggccggcgcagcacgctgtacaccgattacaccttcggcgtgtgg
gatggccagacgctggtgccggtggccaaggcgtactcgggcctggatgacaaggaaatc
ctcgcgctggaccgctggatccgcgcgaacacgatcgagcgcttcgggccggtccgcagc
gtccgtggcgagcaggtgttcgagctcggcttcgaggcggtgaaccgcagcaagcgccac
aagtccggcatcgcggtgcgctttccgcggatcctgcgctggcggcatgacaaacccgcc
agcgaagcagacacgctggcccagctgcaggcactggcgcggtga
DBGET
integrated database retrieval system
