Stenotrophomonas sp. LM091: BIZ42_17105
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Entry
BIZ42_17105 CDS
T04630
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
slm
Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slm03400
]
BIZ42_17105
Enzymes [BR:
slm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BIZ42_17105
DNA repair and recombination proteins [BR:
slm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BIZ42_17105
Prokaryotic type
BIZ42_17105
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOX63758
UniProt:
A0A1D8YDY2
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All DBs
Position
3833400..3834815
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AA seq
471 aa
AA seq
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MSVALVWFRRDLRLQDNPALQAALDAGHVPVPVYIHAPHEEGDWAPGGASNAWLHRSLAA
LDADLRARGSALVLCQGDSQAELERLIEQTGAVAVYWNRKYEPATQPRDAKIKRELREQG
IEAESHNGSLMFEPWDVATQQGGPYKVFTPFWRNALTRLQLPAPTRVPDRLPAHTAGGET
LDAFGLAPSIPWDRQFWEHWQPGEAGAHEALTVFIDGALNGYREQRDLPDRVGTSLLSPH
LHFGEIAPWQIVRRLQGERSASRDADIDGYIRELGWREFSYHLLHHFPQTPDHNLNPRFD
QFQWAKPDADALRAWQQGRTGIPIVDAGLRELWATGYMHNRVRMIVASYLCKHMRQHWRE
GARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRIFNPVTQSQKFDPQARYITRWVPE
LAALPLKARFAPWQSPQLLAEHAPAYPALPLVDLGEGRDAALAAYRHTGGA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtagcgttggtgtggtttcgccgtgacctgcggttgcaggacaacccggccctg
caggccgcgctggatgccggccatgtgccggtaccggtctacatccatgcgccgcacgaa
gaaggcgactgggcccccggcggcgcatccaatgcctggctgcaccgttcgctggcggca
ctggacgccgacctgcgcgcccgcggctcggcgctggtgctgtgccagggcgacagccaa
gccgagctggagcgcctgatcgagcagaccggggcggtggcggtctactggaaccgcaaa
tacgagccggccacgcagccgcgcgatgcgaagatcaagcgcgaactgcgcgagcagggc
atcgaggccgagagccacaacggcagcctgatgttcgaaccgtgggacgtggcgacccag
cagggtgggccgtacaaagtgttcacgccattctggcgcaatgcgttgacgcgcctgcag
ctgccggcgcccacccgcgtgcctgaccggctgcccgcacacacggcgggcggcgaaacg
ctcgatgccttcggcctggcaccctcgataccgtgggaccggcagttctgggagcattgg
caaccaggcgaggccggtgcgcacgaagcgctgacggtgttcatcgatggtgccctcaac
ggctatcgcgagcagcgtgatctgccggaccgggtaggcacctcgctgctgtcgccgcac
ctgcatttcggcgaaatcgccccgtggcagatcgtccgccggctgcagggcgagcgcagt
gccagccgcgatgccgacatcgacggctacatccgcgagctgggctggcgcgagttttcg
tatcacctgctgcatcacttcccgcagacgccggaccacaacctcaacccgcgcttcgat
cagttccaatgggccaagcccgatgcggacgcgctgcgtgcatggcagcagggccgcacc
ggcattccgatcgtggatgcgggcctgcgtgagctgtgggcgaccggctacatgcacaac
cgcgtgcgcatgatcgtcgccagctacctgtgcaaacacatgcgccagcattggcgcgaa
ggtgcgcgctggttctgggacacactggtcgatgcagacctggccaacaacaccatgggc
tggcagtgggtggccggcacgggggccgacgctgcgccgtacttccggatcttcaatccg
gtgacgcagtcgcagaagttcgatccgcaggcgcgttacatcacgcgctgggtgccggaa
ctggccgcgctgccgctgaaggcacgcttcgcgccctggcaatcgccgcagctgctggcc
gagcacgccccagcctatcccgccttgccgctggtggatctgggcgaaggccgcgacgcc
gccttggccgcgtatcggcacacaggcggggcgtga
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