Shewanella loihica: Shew_1563
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Entry
Shew_1563 CDS
T00489
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
slo
Shewanella loihica
Pathway
slo00020
Citrate cycle (TCA cycle)
slo00480
Glutathione metabolism
slo01100
Metabolic pathways
slo01110
Biosynthesis of secondary metabolites
slo01120
Microbial metabolism in diverse environments
slo01200
Carbon metabolism
slo01210
2-Oxocarboxylic acid metabolism
slo01230
Biosynthesis of amino acids
Module
slo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
slo_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Shew_1563
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Shew_1563
Enzymes [BR:
slo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Shew_1563
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Gene cluster
GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
ABO23430
UniProt:
A3QD82
LinkDB
All DBs
Position
1793391..1795610
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AA seq
739 aa
AA seq
DB search
MNDNPTIIYTETDEAPALATLSLLPIIKHFTAAAGVGVETRDISLSGRVIANFPEFLKPE
QQISDALAELGELATKPEANIIKLPNISASIPQLKACIKELQDKDYALPNYPDEPQNDAE
ADIKARYDKIKGSAVNPVLREGNSDRRAPTSVKNYAKKNPHSMGAWSSDSKSHVAHMEAG
DFYGSEQSVTVAEPTSIDILFEGKDGSSKTLKAGLKLLAGEVIDASTMSKKALVAFMERE
IEAAKAEDVLLSLHLKATMMKVSDPIMFGHAVKVFYKSLFEKHGQLFEELGVDVNNGFGD
VYAKIASLPADKKAEIEADIAAIYTERPALAMVDSDRGITNLHVPSDVIIDASMPAAIRS
SGQMWGPDGKLKDTKALIPDRCYAGVYQETIQFCKENGAFDPTTMGSVPNVGLMAQKAEE
YGSHDKTFEIAADGVVKVVDAAGNLLMSHDVEAGDIWRMCQVKDAPIRDWVKLAVNRARL
SSTPAVFWLDENRAHDAQLIAKVKQYLPEHDTDGLEIHIMAPVAATRFSLERIKQGLDTI
SVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMSGGGLFETGAGGSAPKHVQQVEKEGHL
RWDSLGEFLALGASLEHLSQNYGNPKAQVLADALDNAIGKFLDENRSPSRRVGELDNRGS
HFYLAMYWAQALAAQDSDAELKAQFAPLAEALTNNEAKIVAELNGAQGPAVDLGGYYRLD
AVKAEAAMRPSATLNQLIG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaatccaacgatcatctatacggagacagatgaagctccggctctcgcgacc
ctatctctgttgcctattatcaagcatttcaccgcagccgccggagttggcgttgagaca
cgcgacatctctttatctggccgtgttattgccaatttccctgaatttttaaagccagaa
cagcagatctctgacgcgctcgccgagctgggtgagctggccactaagccagaagcaaac
atcatcaagctgcctaatatcagcgcttctattccacagctaaaagcttgtatcaaggag
ttgcaagataaggattatgcactgcctaactaccctgatgagccgcaaaatgacgcagaa
gctgatatcaaggcacgttacgacaagatcaaagggagtgccgttaacccagtgctgcgt
gaaggtaactcagatcgccgcgcgccgacttctgtaaaaaactacgccaagaagaaccca
cactcaatgggtgcctggagcagcgattctaagtctcatgttgcgcacatggaagccggc
gatttctacggtagcgagcagtcggtgactgttgccgagccaaccagcatagatatcctg
ttcgaaggtaaagatggtagcagcaagacactgaaagctggccttaagttactggccggt
gaggtgattgacgcttctaccatgagcaagaaagccctggttgccttcatggagcgcgaa
atcgaagcggctaaggccgaagatgtattgctgtctctgcaccttaaggcgaccatgatg
aaggtttctgaccctatcatgttcggtcacgcggttaaggtgttctacaagtcactgttt
gaaaagcatggccagctgtttgaagagctgggcgtcgatgttaacaatggctttggtgac
gtctatgcaaagatagctagcctaccagccgacaagaaagccgagatcgaagccgatatc
gccgctatctacaccgagcgtccagccctggctatggttgattcagaccgtggtatcacc
aacctgcacgtgccaagcgatgtgatcatcgatgcctctatgcctgcggcgattcgctct
tcaggtcagatgtggggcccagatggtaagctaaaagacaccaaggcgctgatcccagat
cgttgctacgcaggtgtataccaggaaactatccaattctgtaaagaaaatggcgccttc
gatccaaccaccatgggcagcgtgccaaacgtgggcctgatggcgcagaaggccgaagaa
tatggtagccatgacaagaccttcgaaattgccgccgatggtgtggtcaaggttgtcgat
gccgctggaaatctgttgatgtctcacgacgtcgaagccggtgatatctggagaatgtgt
caggttaaagacgcccctatccgtgactgggttaagcttgccgttaaccgtgcgcgtctg
tcatctacgccagccgtgttctggttagacgagaaccgtgcccacgatgcacagcttatt
gccaaggtgaagcagtatctgcctgagcatgacaccgatggactcgagatccacatcatg
gcgcctgtggcggcgactcgtttctcactggagcgcatcaagcaaggtctggatacaatc
tcggtaaccggtaacgtgctacgtgactacctcaccgatctcttcccaattcttgagctg
ggtaccagcgccaagatgctgtcaatcgtgccgctgatgagtggtggtggattgttcgag
actggtgccggcggtagtgcgcctaagcatgttcagcaggtggagaaagagggtcaccta
cgttgggattctctgggtgagttcctggcactgggcgcgtcactcgagcacctgagccag
aactatggcaaccctaaggcgcaggtattggccgatgcgctggacaatgctatcggtaag
ttcctcgatgaaaaccgttcgccatcacgtcgtgtgggtgagctggataaccgtggtagc
cacttctacctagcgatgtactgggcacaggctttggccgcacaggatagcgacgctgag
ctaaaagcgcagttcgcgccacttgccgaagcactaaccaataacgaagctaagatagtt
gccgagttaaatggtgcgcagggccctgcggttgatttaggcggttactatcgcctggat
gctgttaaggcggaagcggcgatgcgtccaagcgcgacgctgaaccagctgataggctaa
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