Shewanella loihica: Shew_1894
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Entry
Shew_1894 CDS
T00489
Name
(GenBank) conserved hypothetical protein
Organism
slo
Shewanella loihica
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAN1_HTH
VRR_NUC
TPR_14
TPR_16
Motif
Other DBs
NCBI-ProteinID:
ABO23760
UniProt:
A3QE62
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Position
2187732..2189663
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AA seq
643 aa
AA seq
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MTQRENEKPVQVKKPVRISGEASSTAKVLPTYYYLSNFLLMLEGVARRYGDLLDEVELGF
VDTFSALTPDAQCLLVRLISRQGPWFCEAQLNYSEIEGIPEAISELFKHSLICYEQPDTA
WLLQKSTKTELSQALVETSQALVKDIKRLKKSELIQYAQETGLLPNLLRRLAPAQHWFCL
SPQVVYRRFELLYFERMSQSLSQFILADLGIHNFEAYSTSIASRSFNTRAEIEGLYTLSS
LYQEFEEGGLSGKPSDIGIENFDSFCQRLTELPDFTKEAGNEKLNRMTQGLWLMAARQLE
RLGHFERALALYGNTKKPPSRERQARCLNKLGRDDEALEFVELMLASPMEESERLVARRL
QKSLHRSLGRAAPKPWQGEFDTFKLECQRTANDENLEGRESNAEGAGRVEQCAARHLSTM
QGEQLRLCVEVENRLFCSLFGLAFWDIIFTDVGGAFANSYQSRPSDMYQSEFYPRRKQAI
DKRLAALASGDTQMIMEHFHQKCGITNDWVHWPLFEELSFDALGLESAQSRDKDQTPLLL
QLALTAFSGAFLANLFRQMLFDLRYYRAGFPDLICFHLTAEYLAIERHATDDGAPNLIDS
RVTAELIEVKGPGDALRDNQTVWLDWFNRNGVKASVCYLSWLD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcgagagaacgaaaaaccagtacaggttaaaaaaccggtaaggataagtgga
gaagcgtcaagcacggctaaggtgcttccgacctattactacctcagcaattttctgcta
atgcttgagggcgtcgcccgccgctatggcgatctcctcgatgaggtcgagctcggcttc
gtcgataccttctcagccttgacccctgatgcccagtgcctgcttgtcaggctgatctca
cgccagggcccctggttctgtgaggctcagctaaattacagtgagatcgaagggatccca
gaggctatctccgagctttttaagcacagtcttatctgctatgagcagcccgatacggcc
tggctgctgcaaaagagcactaagacggagctaagccaggccttggttgagacaagccaa
gccttggttaaggatatcaagcggttaaagaagagtgagcttatccagtatgcccaagag
acaggcttgttaccaaatctgctgaggcgtttggcaccagcacagcattggttctgcctt
agccctcaggtcgtctatcgccgcttcgaattactctatttcgagcgcatgagtcagtcc
ttgagtcagtttatcttggccgatcttggtattcataattttgaagcgtactcgaccagc
atcgccagtcgcagcttcaatacgcgagccgagatagaaggcttgtatacgttgtctagc
ctataccaagagtttgaagagggtggtctgagcggcaagcccagtgatattggtatcgaa
aattttgattcattttgtcaaaggctcaccgaactgcccgatttcaccaaagaggctggc
aatgaaaagctgaaccgcatgacccaagggctctggctaatggcggcgcgccaattagag
cgtttgggtcactttgagcgcgccttagccctgtatggaaacacaaagaaaccgcctagc
cgggagcgccaggctcgctgcctgaataagcttggccgtgatgatgaggcgttagaattt
gtagagctgatgttagcgtctcctatggaggagagtgagcgtctggtcgccaggcgtttg
cagaaaagccttcatcgcagcctgggacgggcggcgcccaagccttggcaaggggagttt
gataccttcaaactagaatgtcagcgcacagcaaatgatgagaacttagaaggcagagag
tcaaacgccgagggtgctggacgcgttgagcaatgcgccgccagacacttgagcactatg
cagggtgagcagttgcggctttgtgtcgaggtggagaaccgtctcttctgtagcctgttt
ggcctggccttctgggacattatcttcaccgatgttggcggcgccttcgctaattcctat
cagagcaggccgagcgacatgtaccagagtgagttctacccaaggcgcaaacaagcgata
gataagagactcgcggcattggcctcgggtgacacccagatgatcatggaacattttcat
caaaaatgcggcatcaccaacgactgggtgcattggccattgtttgaggagttaagcttt
gatgccttagggttggaatcagcccaaagccgagacaaggatcagacccccctgttactg
cagctggcgctgacagcattcagcggggcctttttagcgaatctgtttcgtcagatgctg
ttcgatctgcgttattaccgcgcgggctttcccgatcttatctgttttcatctaactgcc
gaatatcttgcaatcgaacgtcacgcaaccgatgacggggcgccaaacttaattgatagc
agagtcacagccgagcttatcgaggtgaagggcccgggagatgccctaagagataatcag
acagtctggctggattggtttaatcgaaacggcgttaaggccagcgtctgctatctctct
tggctcgactaa
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