Shewanella loihica: Shew_2665
Help
Entry
Shew_2665 CDS
T00489
Name
(GenBank) beta-ketoacyl synthase
Organism
slo
Shewanella loihica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP-binding
ketoacyl-synt
Ketoacyl-synt_C
Acyl_transf_1
KR
KAsynt_C_assoc
PS-DH
PKS_DH_N
adh_short
IMCp
Motif
Other DBs
NCBI-ProteinID:
ABO24531
UniProt:
A3QGD3
LinkDB
All DBs
Position
3140217..3148076
Genome browser
AA seq
2619 aa
AA seq
DB search
MSQTETSKTSSDQRLNKRLKDMPIAIVGMASIFANSRYLNKFWDLICDKIDAITEVPDTH
WQVDDYYDSDKSAPDKSYCKRGGFMPEVNFNPMEFGLPPNILELTDTSQLLSLIVAKEVL
ADAKLPSDYDRNKIGITLGVGGGQKISHSLNARLQYPVLKKVFKHSGISDADSEMLIKKF
QDQYVHWEENSFPGSLGNVIAGRIANRFDLGGMNCVVDAACAGSLAAMRMALSELVDGRA
EMMITGGVCTDNSPSMYMSFSKTPAFTTNETVQPFDIDSKGMMIGEGIGMVALKRLEDAE
RDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDDAGFPPHTLGLMEAHGTGT
AAGDVAEFNGLKSVFSEGCKTTQHIALGSVKSQIGHTKSTAGTAGLIKAALALHHKVLPP
TINVDQPNPKLDIANSPFYLNTETRPWLPRPDGTPRRAGISSFGFGGTNFHFVLEEYQRE
HSRDLGKLTQFRQRAVPQSLLISGADKAGLIATIRQLVADADKQSLDVLASQHPLRMLDA
SAPRLGLVVSDRDSLKTQLNQALSRLEAGDEAYWSLPGGLHYRISSLANPKVAAVFAGQG
AQYLNMGRELSCHFPEMREQFVLADKVFASQDKTPLSQLVYPVPVFTTEERKAQEALLTN
TANAQSAIGAISMGQYTLLKQAGFTPDMVAGHSFGELSALCAAGVISLEDYYQLTFARGD
AMASPSAESAEGADRGTMFAIITKTAEDLTRLEATLIAFEGVKVANYNAPTQLVIAGPTD
ATTQAAKALSELGFKAIALPVSGAFHTPLVGHAQAPFAEAIDKVKFAKPALPVYANASGA
RYANVAKTIKNEFKQHMLQSVRFSEQLEAMYADGARVFIEFGPKNILQKLVENTLSDKLD
TLCTISLNPNPKGDSDLQLRQGAMQLAVCGIALDEIDPYQTEAAQAEPVSPMNITLNATN
YISPATLAKMEKSLNTGTITPQTRVQEKIVEVEKLVEVEKIVEKFVEVEKIVEKSIPAAQ
APQANDSHGSVINTPAIQTLQTIAGDDALTALFAAQQQTAQLHQQFLTIPQQYGETVTQL
MTAQAQMAAAGVAIPESLQRAMEQFHQHQAQTLQSHTQFLEMQALSHQSALSLLSHGAMA
PQASAPSRVVFTPASTPAPNPIKATVPAAAPAVTAAPQVQATVNPPVATPAKVQQTVQPI
APQPMAPAQSPAIEPVSMAPSVNLGSEQVQQTMLSVVAEKTGYPTEMLALEMDMEADLGI
DSIKRVEILGTVQDELPALPELSPEDLAECRTLGEIVAYMESKLPAAGAHITETAAGAIQ
QAAAGAVATPEVQNTATSGLSSTQVQETMLTVVADKTGYPTEMLALEMDMEADLGIDSIK
RVEILGTVQDELPNLPELSPEDLAECRTLGEIVAYMESKLPAAGANISETAVGAIQQAAT
GLSSTQVQETMLTVVADKTGYPTEMLSLEMDMEADLGIDSIKRVEILGTVQDELPGLPEL
SPEDLAECRTLGEIVSYMNSKLPAAGAHITETAAGAIQQAAGAMNSQQPTAGAPIQQAAA
GLSSTQVQETMLSVVADKTGYPTEMLALEMDMEADLGIDSIKRVEILGTVQDELPGLPEL
SPEDLAECRTLGEIVAYMNSKLTATGAALSPEVQSSVATDSLSSTQVQQTMLTVVADKTG
YPTEMLSLEMDMEADLGIDSIKRVEILGTVQDELPGLPDLNPEDLAECRTLGEIVAYMNS
KLPAADAIVDTTSSQEQSASVTQVQAISAEPLVELPPHSEVALKKLEAAKPDAEGFAANA
TLVIQDDGHNAGVLAEKLSNKGLKVVVVRLPEGQPQSPLSSAIASWQPEGLAEQDVMQAI
AGISADHGNIAGFVHLQPQQEANAVSEIQLSDAGFNHLSSAFLWAKHLQAPLSAQTGRRC
FVTVSRIDGGFGYLDAKQLAKSELNQAALSGLTKTLSHEWPGIFCRALDLAPEMSAAQLS
DAVLAELMDSDSGLNEVGISVDAGGKLCRHRLQPGEAAIKTAESQLDSSDKILVTGGAKG
VTFECALALAKRCQSHFILAGRSEHISTKDLPEWAQGKTIGELKQAAIAHLLASGDKPTP
KQVDALIWPVKSSLEIQAALNAFEAVGASAEYLAMDVSKAEAIEQALGAINQLTPITGLI
HGAGVLADKHIQDKTLDELARVYGTKVAGLKALLSVIDPAQLKLVALFSSAAGFYGNTGQ
SDYAMANEILNKAALQLTHKSQAKVMSFNWGPWDGGMVNPALKKMFVERGVYVIPLQAGA
ELFATQLLGDSGVQLLVGSDMQGNTAKADEASSVKKPDADEVHVAQHPLPPVTLTRQLTP
ATMAFVSDHVIGGNPVLPTVCAIQWMREAARAHIGAPVKVRSYKLLKGIIFDTEAPKTLV
LTLTPEYTGDSLTAIQALISSEGRPQYQASLCLMDGEDCSAPIKAFEGQYNGEAVTDAST
LYSDGTLFHGPRLQGLDKVLKFDEQGLIASVSLPQVREADCGEFVPSLSSAGCQPFAEDL
LLQAMLVWARLSYGAASLPSAIDEFISVQPMHGGETGYIELNVVKSNRRSLTADVALYHQ
DGRLSALIKGARITISSTLNAAFVPHGARGETANEEATQ
NT seq
7860 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccgaaacatcaaagacgtcaagcgatcagcgcctcaacaagcgtctgaaa
gatatgcccattgccatcgttggcatggcgagcatctttgccaactcacgttatctcaac
aaattttgggatctgatctgcgacaagattgacgccatcaccgaggtgccagacacccat
tggcaggtcgacgattactacgacagcgataagagcgcgccggacaagagctactgcaaa
cgcggcggcttcatgcccgaggtcaacttcaacccgatggagtttggcctgccgcccaac
atcctagagctgaccgacacctcacagctgttgtcactcatcgtcgccaaagaggtactc
gccgatgccaagctaccgagcgactacgacagaaacaagataggcattaccctaggtgtg
ggcggcggtcagaagatcagccacagtctcaacgccaggctgcaatatcctgtgctgaaa
aaggtgttcaagcacagcggcatcagcgacgccgacagcgagatgctgatcaagaaattt
caggaccaatatgtccactgggaagagaactccttccctggctctctgggcaatgtgatc
gccggacgtatcgccaaccgtttcgacttaggcggcatgaactgcgtcgtcgacgccgcc
tgcgccggctcgctggcagccatgcgcatggcgctcagcgaactggtggacggccgcgcc
gagatgatgatcaccggtggcgtctgtaccgacaactccccctccatgtatatgagcttc
tccaagacgccagccttcaccaccaacgagacggtgcagcccttcgatatcgactccaag
gggatgatgataggcgaagggataggcatggtggccctgaagcgtttggaagatgccgag
cgcgatggcgatcgcatctatgcggtgatcaagggcgtaggcgcctcgtcggacggtaag
tttaagtctatctacgcaccgcgccccgaaggccaggccaaggcgctcaaacgcgcctac
gacgatgccggattcccgccacataccttagggctgatggaagcccacggcacgggcacg
gccgccggtgacgtggccgagtttaacggcctcaagtctgtgttcagcgaaggctgcaag
acgacccagcatatcgccctgggctcggtgaagtcgcaaatcggccataccaagtcgacc
gcaggcacggcggggcttatcaaggcggcgctggcgctacaccacaaggtgttaccaccg
accatcaatgtggaccagcccaatcctaaactggatatcgccaactcgcctttctacctc
aataccgagacgcgcccctggctgccacgcccggacggcaccccgcgccgcgccggtatc
agctctttcggctttggcggcactaacttccacttcgtgctcgaagagtaccagcgcgaa
catagccgagatctgggcaagctgacccaattccgtcagcgcgccgtgcctcagagcttg
ctgatcagcggcgccgacaaggctggcctcatcgccaccatcaggcagcttgttgcagac
gcagataaacaatccctcgacgtcctggccagtcaacatccgctgcgcatgcttgacgcc
agtgccccgcgtcttggcctggtcgttagcgacagagacagcctcaagacccagcttaat
caggcgcttagccgcctggaagcgggcgatgaggcatactggtcgctacctggcggcctg
cactatcgcatcagcagtctggctaaccctaaagtggccgcggtgtttgccggacaaggc
gcccaatacctcaacatgggccgtgagctaagctgtcatttccccgagatgcgcgagcaa
tttgtactggccgacaaggtatttgccagccaggataagacgcccttgtcgcaactggtg
tacccggtgccagtcttcacgactgaggagcgcaaggcacaagaggcactactgaccaat
accgccaatgcccagagcgccatcggcgccatctccatggggcaatacaccctgctcaag
caagccggcttcacgcccgacatggtggcaggccacagctttggtgaactcagcgccctg
tgcgccgccggggtgatcagcctcgaagactattaccagctgacattcgcccgtggcgat
gccatggccagcccaagtgccgagagtgccgagggtgccgatcgcggtaccatgttcgcc
atcatcaccaaaaccgccgaggatctgactcgactggaagctacccttatcgcctttgag
ggggttaaggtcgccaactacaacgcgccgacccagctggtgatcgccggaccgacagat
gccaccacccaggcggccaaggcccttagcgagctcggtttcaaggcgatcgccctgcca
gtatccggcgccttccacacaccattggtgggccacgcccaggcaccgtttgccgaggcg
atcgacaaggtgaagtttgccaaaccggcgctgcctgtgtacgccaacgccagcggcgct
cgctacgccaatgtcgccaagaccatcaagaatgagtttaagcagcacatgctgcaatct
gtgcgctttagcgagcagctagaagccatgtacgccgatggtgcgcgcgtcttcatcgag
ttcggcccgaagaatattctacagaaactggtggagaacacccttagcgacaagctagat
accctgtgcaccatcagcctcaaccctaaccctaagggcgatagcgacctgcaacttcgt
cagggcgccatgcagcttgccgtctgcggcatcgcactggatgagatagacccataccaa
accgaagcggcccaggccgagccagtctctcccatgaatatcacgctcaacgcgaccaac
tacatcagcccggcgaccctggcgaagatggaaaaatcccttaacacgggcaccatcacg
ccacagacccgagtgcaagagaagatagtggaagttgaaaaactggtcgaagtcgaaaaa
attgtcgaaaaatttgtagaagtagagaagatagtggaaaaatcgatccccgcagcccaa
gcgccacaggccaatgactctcatggctcagtcatcaatacacctgccatccagacgtta
cagacaatcgctggcgatgatgccctgacggcactgttcgccgcccagcaacagacggct
cagctgcatcagcaattcttgaccataccgcagcagtatggcgagacagtcactcagctg
atgacggcgcaggcacagatggccgccgccggggtcgcgatccctgagagcctgcagcgc
gcaatggagcagttccaccaacatcaggcgcaaacgttacaaagccatactcagttcctc
gagatgcaggccttaagccatcaaagcgccttaagcctgctcagccacggagctatggcg
ccgcaagcaagcgcacctagccgggttgtattcacgccagcatcgactccggcgccaaac
ccaataaaagccactgtgcctgcggccgcgccagcagttacggcagcacctcaggtacaa
gcgactgttaatccgccagtagccacacctgctaaggtgcagcaaactgtacaacctatc
gcccctcagccaatggcacctgcacaatcacctgccattgagccagtgagtatggcgcca
agtgttaacctgggcagtgaacaggtgcaacagaccatgctaagcgtggtggccgaaaaa
accggttacccaaccgagatgctggcccttgagatggacatggaggccgacctcggcatc
gattccatcaagcgcgtggagatcttaggcacagtgcaagatgagctgccggctctgccg
gagctgagcccggaagatctggccgagtgtcgcaccctgggtgagatcgtggcgtatatg
gaaagcaagctgccggccgcaggtgctcacattacagaaaccgccgctggcgcaattcaa
caagccgccgctggcgctgttgctaccccagaggttcaaaacacagctactagcggttta
tcttcgacacaagtccaagagaccatgctcacagttgtggctgacaagacaggctaccct
accgagatgttggcccttgagatggacatggaagccgatctcggcatcgattccatcaag
cgcgtggagatcttaggcacagtacaagatgagctgccaaacctacccgaactcagcccg
gaagatctggccgagtgccgcaccttgggtgagatcgtggcgtatatggaaagcaagctg
ccggccgcaggagctaatatttcagaaaccgccgttggcgcaattcaacaagccgccaca
ggcttgtcatcgacacaagtccaagaaaccatgctcacagttgtggccgacaagacaggc
tacccaaccgaaatgctatcacttgagatggacatggaggccgatctcggcatcgattcc
atcaagcgcgtagagatcttaggcacagtacaggatgagctgccaggactgccggaactc
agcccagaagatctggccgagtgccgtaccctgggtgaaattgttagctatatgaatagc
aagctgccagctgcaggtgctcatattacagaaaccgccgctggcgcaattcaacaagcc
gcaggcgctatgaacagccaacagccaaccgcaggtgcacctattcagcaagccgccgct
ggcttgtcttcgacacaagtccaagaaaccatgctgagcgtggtagctgataagacaggt
tacccaactgagatgctggcccttgagatggatatggaggccgatcttggcatcgactct
atcaagcgggtcgagatcttaggcacagttcaagacgaactgccgggactgcctgaactc
agcccagaagatctggccgagtgccgcaccctgggggaaatcgtcgcttacatgaatagc
aagctgaccgccacaggcgctgcactcagcccagaggttcaaagctctgttgcgactgat
agcctgtcatcaacacaggtacagcagaccatgctcactgtggtggccgacaagacgggc
tacccaaccgagatgctgtcgctggagatggacatggaagccgaccttggtatcgactca
attaaacgagtcgagatcttaggcacagttcaagacgaactgccgggactgccggatctc
aacccggaagatctggccgagtgccgcactctgggtgagatcgtggcgtatatgaacagc
aagctgcccgccgcagacgcgatagttgacacgacaagcagccaagagcagagcgcctcg
gttactcaggtgcaagccatctccgccgagcctttagtcgagctaccgcctcacagcgag
gtggcgctaaaaaagcttgaagcggcgaagcctgatgccgagggtttcgccgccaatgct
accctggtgatccaagacgatggtcacaatgccggggtactggccgagaaactcagcaac
aagggactcaaggtcgtggttgtgcgcctgccagaaggtcagcctcagtcaccgctgagc
agcgccatcgccagctggcagccagaaggactggctgagcaagatgtgatgcaggcgata
gcaggaattagcgcagaccacggtaacattgcaggttttgtacacctacagcctcagcag
gaagccaacgctgtctcagagatacaactgagcgacgctggctttaaccacctgagttcg
gcgttcctctgggccaagcatctgcaggcgccattaagcgcgcagacgggtcgtcgctgc
tttgtcaccgtcagtcgtatcgacggcggcttcggctacctggatgctaagcaactggcc
aagagcgaacttaatcaggccgcgctttcgggtctcaccaagactctgagtcatgaatgg
ccaggcatcttctgccgcgcgttggacttagcgccagagatgagcgcggcgcagctgagc
gatgccgtactcgcggagctcatggacagcgacagcggtctcaacgaggtcggtatcagt
gtcgatgccggcggcaaactgtgccgtcatcggctacagccgggtgaagcggcgataaaa
accgcagaatcccagctggatagctcagataaaatactggtgaccgggggggcaaaaggg
gtaaccttcgaatgtgccctggcactggctaagcgttgtcagtcgcactttatcctggcc
ggtcgcagcgaacatattagcacgaaggatctgccagaatgggcccagggcaagactatc
ggcgaacttaagcaggccgctatcgctcatctactcgccagcggtgacaagccgacgcct
aaacaggtcgacgccctcatctggccggtaaagagtagccttgagatccaggccgccctc
aacgccttcgaggcggtgggcgcctcggcggaatatctggcgatggatgtcagcaaggca
gaggcgatcgagcaggccctaggcgccatcaatcagctaacgccaattacaggactcatc
cacggtgcgggcgtactggccgataaacacatacaagacaaaaccttagatgagcttgcg
cgagtctacggcactaaggtggccgggcttaaggcgctgctaagcgtgatcgatcccgcc
cagcttaagctggttgccctcttctcttcggcggccggtttctacggcaacacggggcag
agcgactacgccatggcgaacgagatcctcaacaaggcggcactgcaactcacccacaag
agccaggctaaggtgatgagctttaactggggcccttgggatggcggcatggtcaatcct
gcgctgaagaagatgtttgtcgagcgcggcgtctatgtgatcccgctgcaggcgggtgcc
gagctgtttgccactcagctacttggcgacagcggcgtacagctgctggtaggcagcgat
atgcaaggcaacacagctaaagcagatgaggcaagctcagtaaaaaagcctgatgcggat
gaggtgcacgttgcacagcatccgctgccgcctgtcaccttaacgcgccaattaacgccc
gcgaccatggcctttgtctcagaccatgtgatcggcggtaacccggtattaccgacggtt
tgtgctatccaatggatgcgtgaagccgctcgggcgcacattggcgccccggtaaaggtg
cgcagctataagctgctcaaaggcattattttcgacaccgaagcgccgaaaaccttagtg
cttacgctaacccctgaatataccggcgatagcctgacggccattcaggccttaataagc
agcgagggacggccgcagtaccaggcgagcctttgtttgatggatggcgaggactgctcg
gcgccaatcaaggccttcgaagggcagtacaatggcgaggcggtcaccgatgccagcacg
ctctacagtgacggcaccctgtttcatgggccaagactgcagggattggataaggtactt
aagttcgatgagcagggacttatcgcctctgtaagcctgccccaggtgcgcgaagccgac
tgcggcgagtttgtacctagcctaagcagcgcaggctgtcagccttttgccgaagatctc
ttgctccaagccatgttggtctgggcaaggctcagctatggggcggccagtttgccatcg
gccatcgacgagttcatcagtgtgcagccgatgcacggcggcgaaaccggctatatagag
ctgaatgtggtcaagagcaatcgcagaagcctgacggccgatgtggcgctttaccatcaa
gatggtcgcctgagcgccctgataaaaggggccaggatcaccatcagctcaaccctcaat
gccgccttcgtgccgcacggcgcacgcggtgaaacggccaacgaggaggcgacgcagtga
DBGET
integrated database retrieval system