Shewanella loihica: Shew_3172
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Entry
Shew_3172 CDS
T00489
Name
(GenBank) 4-aminobutyrate aminotransferase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
slo
Shewanella loihica
Pathway
slo00250
Alanine, aspartate and glutamate metabolism
slo00280
Valine, leucine and isoleucine degradation
slo00310
Lysine degradation
slo00410
beta-Alanine metabolism
slo00640
Propanoate metabolism
slo00650
Butanoate metabolism
slo01100
Metabolic pathways
slo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Shew_3172
00650 Butanoate metabolism
Shew_3172
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Shew_3172
00280 Valine, leucine and isoleucine degradation
Shew_3172
00310 Lysine degradation
Shew_3172
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Shew_3172
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slo01007
]
Shew_3172
Enzymes [BR:
slo01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
Shew_3172
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
Shew_3172
2.6.1.48 5-aminovalerate transaminase
Shew_3172
Amino acid related enzymes [BR:
slo01007
]
Aminotransferase (transaminase)
Class III
Shew_3172
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABO25038
UniProt:
A3QHU0
LinkDB
All DBs
Position
complement(3775635..3776915)
Genome browser
AA seq
426 aa
AA seq
DB search
MSNAELQARKVQAIARGQGNAYPVYVERALNAELWDVEGKRYIDFGTGIAVCNTGHSHPK
VVAAVKAQLDNFSHTCVMVNPYESAVALAEQLNRIAPGGSDKKAIFVTTGAEAVENCVKI
ARAHTGRRGVIAFNGGFHGRTNLTMALTGKITPYKHQFGPFAGDIFHAPYPVAFHGVSVK
DSLKAIEHLFKVDIAPCDVAAIVVEPVQGEGGFYAAPPEFLQALRALCDQHGIVLVMDEI
QTGFGRTGKMFSCEHAGVEPDLMTMAKGIAGGFPLAAVVGKSEIMDAPLPGGLGGTYGGS
PVGCVAALAVLEVMQEEQLVERAVKIGDSFNQALSALKEQYPQLIGEVRNQGAMIAMELV
IDGDIEQPNTALTQAIIANAAAHGLVLLACGFYGNVIRFLPALTISDEIMAEGLAKFKTL
FESLVD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcagaattacaggcgcgtaaggtacaggcgatcgccaggggacaggggaac
gcctatcccgtctatgtggagcgggcgttaaacgccgagctgtgggatgtcgaaggcaag
cgctacatcgacttcggtacagggatcgccgtgtgtaacacgggtcatagccatcccaag
gtggtggcggcggtcaaggcgcagctggataacttcagccacacctgtgtgatggtgaac
ccttacgagtcggcggtggcgctggcggagcagcttaatcgcatcgcccccggcggtagc
gacaagaaggcgatcttcgtgaccacgggcgccgaggcggtggaaaattgcgtcaagatc
gctagggcccacacagggcgtcgcggcgttatcgccttcaacggtggcttccatggccgc
accaacctgaccatggcgctgacgggtaagatcaccccctacaagcatcagtttggcccc
ttcgccggggatatcttccacgcgccttatccggtggcgttccatggcgtgagcgtgaaa
gactccctcaaggcgatcgagcatctgtttaaggtggatatcgctccttgtgatgtggcg
gcgatcgtggtcgagcctgtgcagggcgagggcggtttttacgccgcgccgccagaattc
ttacaggccctcagggcactgtgcgatcagcatggtatcgtgctggtgatggatgagatc
cagaccggctttggccgtaccggcaagatgttcagctgtgaacacgcgggcgtcgagccg
gatctgatgaccatggccaaggggatcgccggtggcttcccactcgcggccgtggtgggt
aagagcgagatcatggacgcgccgttgccgggaggccttggcggcacttatggcggctca
cccgtgggctgcgtggcggcgctggcggtgctcgaggtgatgcaagaggagcagctggtg
gagcgcgccgttaagataggcgacagcttcaatcaggcgctctctgccctcaaggagcaa
tatccacagctgattggcgaggtgcgcaatcaaggcgccatgatcgccatggagttggtg
atcgacggtgacattgagcagcccaacacggcattgacccaggcgatcatcgccaacgcc
gcggcccatggcttggtgctgctggcctgtggcttctatggcaacgtgatccgcttcctg
ccggcgttgaccatcagcgatgagatcatggccgaggggctggccaagtttaagacgctg
ttcgagagcctggtggactaa
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