Syntrophothermus lipocalidus: Slip_0583
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Entry
Slip_0583 CDS
T01253
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp00061
Fatty acid biosynthesis
slp00071
Fatty acid degradation
slp01100
Metabolic pathways
slp01212
Fatty acid metabolism
slp02024
Quorum sensing
Module
slp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Slip_0583
00071 Fatty acid degradation
Slip_0583
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Slip_0583
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
slp01004
]
Slip_0583
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slp04147
]
Slip_0583
Enzymes [BR:
slp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Slip_0583
Lipid biosynthesis proteins [BR:
slp01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Slip_0583
Exosome [BR:
slp04147
]
Exosomal proteins
Exosomal proteins of breast milk
Slip_0583
Exosomal proteins of breast cancer cells
Slip_0583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ADI01367
UniProt:
D7CKY2
LinkDB
All DBs
Position
603338..604849
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AA seq
503 aa
AA seq
DB search
MVMNVCGLVSRNASLRPHSKAIICGDDGRIYSWSEFEKMVTRFSNALASMGVEKGDRVAI
YLPNSPEFLFTYFAVARIGAIAVPFNILFRSGEITYVLNNSRAKVLVGASAETREYLAGA
GGDVPHLEKVITVGERINGSLDFHALVSRAPEAFDVVDCSPDDIVSILYTSGTTGQPKGA
MHSHGNLMAIGTLSSRILRIDDQDVLLTPTPFCHICFVLSALGPLNVGACSVTMRRFSPD
KALELISRYRVTHFTGVPTMFIYMLHHFEEDKYDLTSWKYAYAAGASMPVQYIKEVEEKF
GVEFAELYGLTETTSTVTYNRIGHGKKGSVGLAAEGTEVKLVDEAGNQARVGEVGEILVK
GPGVFKGYWEMPEATREAFDGEWYRTGDLGKYDEEGYLYIVGRKKEMIVCGGYNVYPREI
EEVICQHPKVAEAAVVGVRDSARNEIPKAFVRLNEGEEMTEQELLEFCAQRMASYKVPRQ
VEFVPELPKSPSGKILKRLLPAS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgaacgtctgcgggctagtaagtagaaatgcctcgcttcgcccgcacagtaag
gctattatttgcggtgatgacgggaggatatatagctggtccgagtttgagaagatggtc
acgagattcagcaatgccctggcaagtatgggggtggaaaaaggggatagggtggcaatt
tacctgccgaattcgccggagtttttattcacgtatttcgcagtagcaaggataggagcc
atagccgttccgtttaacattttgttcagaagcggagaaataacgtatgtcctcaacaat
tcaagggccaaggtgctggttggtgcttcggccgagacgagagagtaccttgccggcgcc
gggggtgacgtgcctcatctagaaaaggtcattacagtgggggaacggataaatggaagc
ctcgatttccatgcgttggtgtcgcgtgctccagaagcgttcgatgtggttgactgcagc
cctgatgatatagtatctatactttacacctcgggcaccaccggacagccgaaaggagct
atgcacagtcacgggaatttgatggccatcgggacactgagctcaagaatcttacgaatt
gacgaccaagacgttctgctgacgccgactcccttctgtcatatatgttttgtgttgagc
gcgctggggcctctgaatgtaggagcctgctcagtgactatgcggagattcagtccggac
aaggcactggagctgatatcgcgctaccgggtcactcacttcaccggtgttcctaccatg
tttatatacatgctgcatcatttcgaagaggataaatacgacctcacgtcttggaagtat
gcgtatgctgcgggagcttctatgccggtccaatatattaaggaagtagaagagaagttc
ggagtagagtttgcagaactgtacggtctcaccgagactacctccacggtaacgtataat
aggatcggacacggtaagaagggatcagttgggctcgcggctgaggggaccgaagtgaag
ctggtggacgaggccggaaaccaggcccgggtcggtgaagttggcgagatactggtgaag
ggacccggagttttcaagggttactgggaaatgccggaggcaaccagggaggcattcgac
ggggagtggtatcgcactggtgaccttgggaaatacgatgaggaagggtacttgtacatt
gttggaaggaagaaggagatgatagtttgcggtggatacaatgtctatcctcgggagatc
gaagaggttatttgccaacacccaaaggtcgcggaagctgccgttgtgggcgttagagat
tcggctagaaacgagattcccaaggcctttgtccgactgaacgagggcgaggagatgacg
gagcaagaactactagaattctgcgcgcagagaatggcttcttataaggtaccgcgtcag
gtggaatttgtacccgagttgccgaagagcccctcagggaaaatcctaaagagattgcta
cccgcaagctaa
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