KEGG   Syntrophothermus lipocalidus: Slip_1510Help
Entry
Slip_1510         CDS       T01253                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
slp  Syntrophothermus lipocalidus
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:slp00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Slip_1510
Enzymes [BR:slp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Slip_1510
DNA repair and recombination proteins [BR:slp03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Slip_1510
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
1567312..1568214
Genome map
AA seq 300 aa AA seqDB search
MCLPVVVVEGEKLELTNLSKVMWPEENITKADFIDYCVRIAPYILPHLKDRPLVFTRYPD
GIYGKAFYQKNVPDYAPDWLMTYDEEINDGNRRKLVRYVLIKDLKSLVWAANQASLEMHP
WLSRAGTIDHPDFVVFDLDPMENTGFEDARQLALALKRLLEMEGLKGFPKTSGATGLQVY
VPVEARYTYRQVRTFAEFFCRVLEKTFPEKATTERSIKDRRGKVYLDYLQNVKGKTLIAP
YSPRPLAEATVSAPVTWDELESGAVPSMFKIRNMAERLEKMGDLFRGVLEEKQRIDRRLQ
NT seq 903 nt NT seq  +upstreamnt  +downstreamnt
ttgtgtttgccggtggtagtcgttgaaggcgaaaagctggaactgacaaacctctcaaag
gtgatgtggcctgaggaaaatataacaaaagctgattttatcgattactgcgtgcggata
gctccctacattctaccccacctcaaggatcgccccctggttttcacgcgctaccccgat
ggaatatacggaaaggctttttaccagaagaacgtacccgattacgctccggactggctc
atgacttacgatgaagaaattaatgacggcaaccggaggaagctggtcaggtatgtactc
ataaaggatctgaaaagccttgtctgggccgccaaccaggccagcctggagatgcatccc
tggctttcccgggcggggaccatcgaccacccggacttcgtggtcttcgatcttgacccc
atggaaaatacaggtttcgaagatgcccggcagctggcgctagccttgaaaagattgctc
gaaatggaagggctgaagggcttccccaagacttccggcgctaccggcctgcaggtctac
gtgccggtggaggccaggtacacctaccgtcaggtcaggacctttgccgaattcttctgt
agggtgctggaaaagacttttccggaaaaagccacgacggaaaggagtataaaagaccgc
aggggtaaagtgtacctggattatctgcaaaacgtgaagggcaaaaccctgatagcaccg
tacagcccaaggcctctggcagaagcaacggtttccgcaccggtcacatgggatgaactg
gaaagcggcgcggtgccctccatgttcaaaatccggaacatggctgaaaggctggaaaag
atgggggatctgttcaggggtgtcctggaagaaaagcagcgcatagaccggcggctgcag
taa

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