Serratia liquefaciens: M495_24210
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Entry
M495_24210 CDS
T02740
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
slq
Serratia liquefaciens
Pathway
slq00540
Lipopolysaccharide biosynthesis
slq01100
Metabolic pathways
slq01250
Biosynthesis of nucleotide sugars
Module
slq_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
slq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
M495_24210 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
slq01005
]
M495_24210 (rfaD)
Enzymes [BR:
slq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
M495_24210 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
slq01005
]
Core region
M495_24210 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
ThiF
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AGQ33427
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Position
5105925..5106854
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AA seq
309 aa
AA seq
DB search
MIIVTGGAGMIGSNIIKALNDTGYRDILVVDNLKDGTKFANLVDLDIADYIDKEDFIANI
VAGDDLGEIDAVFHEGACSSTTEWDGKYMMDNNYQYSKDLLHYCLDREIPFLYASSAATY
GGREEFIEERQFEEPLNVYGYSKFLFDQYVREILPEADSQICGFRYFNVYGPREGHKGSM
ASVAFHLNSQINRGENPKLFDGSQNFKRDFIYVGDVAAVNLWFWKSGVSGIFNCGTGRAE
TFQAVADAVVDFHQKGAVENIPFPEKLKGRYQAFTQADLTKLRAAGYDAPFKTVAEGVKE
YMAWLNRTA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggtggcgccggcatgatcggcagcaatatcattaaagcgctgaat
gacacagggtatcgcgatatcctggtggtagataacctgaaagacggcaccaaattcgcc
aatctggtcgatctcgacatcgccgactatatcgacaaagaagatttcatcgccaatatc
gtggccggtgacgatctgggtgaaatcgacgcggttttccacgaaggtgcctgctcgtcc
accaccgagtgggacggcaagtacatgatggacaacaactatcagtactctaaagatctg
ctgcactactgcctggatcgcgaaattccgttcctgtacgcctcttctgcagccacctac
ggcggtcgtgaagagtttatcgaagagcgccagtttgaagagccgctgaacgtttacggc
tactcgaaattcctgttcgaccagtacgtacgtgaaattctgcctgaggcagactcgcag
atctgcggcttccgttacttcaacgtctacggcccgcgcgaaggccacaagggcagcatg
gccagcgtggcattccacctgaacagccagatcaaccgcggcgagaacccgaaactgttc
gacggcagccagaacttcaagcgtgatttcatctacgtcggcgacgtagcggcagtgaac
ctgtggttctggaaaagcggcgtctccggcatcttcaactgcggcaccggccgtgcggaa
accttccaggcggtggccgacgcggtagtcgacttccatcaaaaaggcgcagtggaaaac
atcccgttcccggaaaaactcaaaggtcgttatcaggcgtttacccaggccgacctgacc
aagctgcgcgccgccggctatgacgcaccgttcaaaacggtcgccgaaggcgtgaaagag
tacatggcctggttaaaccgcaccgcctaa
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