Salinispira pacifica: L21SP2_2554
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Entry
L21SP2_2554 CDS
T03013
Name
(GenBank) Periplasmic alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
slr
Salinispira pacifica
Pathway
slr00500
Starch and sucrose metabolism
slr01100
Metabolic pathways
slr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
L21SP2_2554
Enzymes [BR:
slr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
L21SP2_2554
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AHC15906
UniProt:
V5WL36
LinkDB
All DBs
Position
complement(2735280..2737097)
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AA seq
605 aa
AA seq
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MKNIKFLFIAVLIPLLLTACATTSLDVPGSYAGEGVAPSQLPEFSWENATVYFVIIDRFA
NGNPANDTSYGRFRDGGDEVGTFHGGDLAGLTAKIEEGYFADLGVNALWISSPLEQIHGW
VGGGDGSFAHFAYHGYYPMDFTRIDANMGTEEEFARFMDAAHENGIRVVMDVVMNHAGYN
SVKDMRKFDFGGWKGEPLPEDWVPENNNWHSHHDYIDYSGQEDAWARWWGPDWVRGGIPG
YPAPGDDDLTSSVGFLPDFRTESSQPVDPPVFLMEKAAAGNSDVEPLENATVRDYLITWL
TDWVRDYGIDGFRIDTAKHVGLDAWQELAVAADEALAEWKAENPEKALDDLPFWMTGEVF
GQGVGRNAYFDNGFDSLINFEFQMNADRAIHADGTVDAEALEGIYSRYARTINSDPGFNM
LSYISSHDTVLFYNTRLSNNGYRVNGGNAGPERQKAAGTALMLVPGAVQVFYGDELAREY
QPYRVGDPGQGTRTPQPWENLNSDVHRHWQKLGRFRASHISVGAGVHSRVEVKDADYAFA
RNYHDLDKVLVVLGGEGSLEIPVEGFWEDGLELRDAYSGSVAAVENGRVTFDAEPSAPLL
IEEAR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatcaaatttttgtttattgcggtgcttattccgctcttgttgacggcctgt
gccaccaccagcctggatgttcccggcagctatgcgggggagggagtagctccttcacag
cttccggaattcagctgggagaatgccacagtgtattttgtgatcatcgaccggttcgcc
aacggtaatcccgccaacgatacaagctacggacgattccgggacggcggcgatgaggtg
ggaacctttcacggcggagaccttgcagggctcactgcgaaaatcgaagaagggtatttc
gccgatctgggggtaaacgccctgtggatttccagtccattggagcagattcacggatgg
gtcggcggaggagacggatcctttgcccattttgcctatcacgggtattaccccatggac
ttcacccggatcgatgccaatatgggaaccgaggaagagttcgcccgttttatggatgcg
gctcatgaaaacggtatccgtgtggtaatggatgtggtgatgaatcatgcggggtacaac
agcgtaaaagatatgcggaaattcgatttcggcggatggaagggcgaacccctccccgag
gattgggttcctgaaaataacaactggcacagccaccacgattacatcgattattccgga
caggaggacgcatgggcccgctggtggggaccggactgggttcggggcggcattcccgga
tatccagctcccggtgacgatgatctgacatcaagcgtggggttcctcccggacttccgc
actgagagcagccagcccgtggatcccccggtcttcctcatggaaaaagccgcggcaggt
aactcggatgtggagcctctggaaaacgcaacagtacgggattatctcattacctggctg
accgactgggtccgggattacggaatagacggtttccggatagataccgccaagcatgtg
ggccttgatgcctggcaggaacttgcagttgcagccgacgaagctctggcggaatggaag
gccgagaatccggaaaaagctctggatgatcttcccttctggatgaccggcgaggtgttc
ggacagggtgtgggcagaaacgcatacttcgacaacggttttgattcactcattaacttc
gagttccagatgaatgccgaccgtgcgatacatgccgacggcacggtggatgcagaagcc
ctggaaggaatctattcccgttatgcccggaccatcaattccgaccccggctttaatatg
ctgtcgtatatcagcagtcacgataccgtactcttttacaacacccgtctgtccaataac
ggctaccgggtgaacggaggaaatgcggggccggaacggcagaaagctgcgggaaccgct
ctgatgctggtacccggtgccgtccaggtattctatggtgatgagctcgcccgggagtac
cagccttaccgtgttggtgaccccggacagggcacccgcaccccccagccctgggagaac
ttgaactccgacgttcaccggcactggcagaagctcggccggttcagagccagccacatc
tcagtgggtgcaggtgtgcacagccgggtggaagtgaaggatgcagattacgcgtttgcc
cggaactatcatgatctggacaaggtgctggtggtcctgggaggagaaggaagtctcgag
atccccgttgaggggttctgggaggacggccttgaactccgggatgcgtacagcggctcg
gttgctgcagtcgagaacggacgggtgacatttgatgctgaaccttccgcacctctgctg
attgaggaagcccgctga
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