Streptomyces lincolnensis: SLINC_1227
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Entry
SLINC_1227 CDS
T04801
Name
(GenBank) hypothetical protein
Organism
sls
Streptomyces lincolnensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOV_C
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ANS63451
UniProt:
A0A1B1M452
LinkDB
All DBs
Position
complement(1465310..1470568)
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AA seq
1752 aa
AA seq
DB search
MATAVMEAEGCLDDLRRGRRAALELKEVTERMLSPEYSGRVLVELLQNAHDAHPARHGEG
RVEIVLDEDEGEHGVLYVANGGKPLGYQNFEALCSIALSSKRPDEGIGHKGIGFKSVLQL
TAAPELYSVVGPTSKSFDGFCFRFARDGDFDRLADQVAPGRPEAVGQLRANLASLKVPVP
VDDIPTAVAPFRRRGLVTVVRLPLRSAEARREAVRQLRELTDDRAPFELFLDRLGKVSVT
HRAGGRRHHRVYTRAVDTLFTARGLKIQQITLRRRTRLIMVTAAVDSERAHEAVAAGLGS
GALKDGWQALADSAVVSVAVPAGEPLERGRLFTFLPMGAERTSPVRGFVNAPFHTDVSRR
TMTESTRWNDLLLDTAAEACARAAVLVDEGRVELPAGALLDLICWEHDQLPRLEVAFKAQ
DREFDDVPFMPVLHPRGARTSFREGYVWRGPGQARVFTPQAVAAAGVPHLIDPLLPSPRV
ERLVALGTARGLDLPPPASVVAGWAERVAATLAEGEFDAGTWADYYHDLSVCVARTGEKL
KGRKVVLTADGTPAPAGAPGLFFRRPDGGTPVALPDLPPALAHSISFVHPDIAWTGRRTS
RRSRARAWLEEQGLVREYSPPALLAVLGEAMHKDRGNEPALREHLLFACALWASSSLDRG
GRGPVIKGLLVPGRNGWVPATEAMFGEGWTGGHSGIGRTLTRLLERTEKVSRSLATAADR
VVRPAQEICAGTRTDARTLRRFLEQQGVRHGLPPTYVTTFQTVKGLQLNARYSFPGLWAL
DLDSAENTQWRSAAERWPNRRPVLYHTVDYRPTRRRVALLPGQREYATFDEESRRLYAEL
IVHGLDHWPGDALEFSFVGGTDRQGTKWPTPLAAFLSEARWIPQSGDDEDAPAFATAGTV
WWWSGQEEPPPYLTVASAALRSRQSDRVLTRLEMLGVRRWDDPDTAVDRLRHLPDLLRRM
PRLRQGRSGHLLGRAYEQAWADLLPADGIGVGYSEILTELLVSRAGTLGVLTAESESESE
SEPVYVADVRGTQQRGLLDRTPLPLLPVADRPLGQRVHDHLEEQGRFAVRRTSEAELDIL
VDRLPIAEAHQVPLLALAGPWLEILLTALVEFDEDRSARARVPSARQVGQRLRACGVVVA
RTAVTRIAGHALDDSGDDRSLLHDDPDEPRLVVVVGEPQPSDWHVLETAATALSTLIGAP
YLSESVRLRFIDLARRGRSVEDVTESDIAAVLGIPRQRLEAVLADRASIRSGSARLVPLL
ACVDLALAEELQRAQETLHDRGELHDWLVARLDLDRADQLLGLVEESDWRSKLSALDVRL
DDANRAWRTMGLPTVDNSETHRRQFQAWLQQHRARLLDRVRDAHTTAHKAGGSLTAYVRL
RSLPGLEPDPGWGLTHWDLSADLLDAHAEAWAATHLPPAPVRQQPSRPVAEVQEECVDTV
HARFPHLRARITAWLDRQGREVPALPSAGEVASAMGAEGLLDFEPIGSRTLIAWLRARGH
WPEDMPATGRAADLGLNDPAPPAPSPAAPGSAPRPTAPGPSLLLNGRAVPVGPDHLRDLA
RQVAADLTPDQLAAAPHPRTPSTSALPRQRTASAREARGGAYRAPARDTQKDLAVGLAGE
VTVGAWLERQFGVPPEESWKSPLRRHVFADGSGDDRLGYDFLIHDRDQTLLYEVKASAHD
RCEFELGESEVARASRLGPDETYVIVHVSHVLDGTRRRITPLPNPFGAPGLAGYHLIGTA
MRLRFDLPPEQG
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacggcggtcatggaggccgagggatgcctcgacgacctgaggcgcggccgcaga
gccgccctcgaactcaaagaggtcaccgagcggatgctctcgcccgagtactcgggacgc
gtgctggtcgaactgctgcagaacgcccacgacgcgcaccccgcccggcacggcgaaggc
cgcgtcgagatcgtcctcgacgaggacgagggcgagcacggcgtgctgtacgtggcgaac
ggcggtaagcccctcgggtaccagaacttcgaagccctgtgcagcatcgccctgtcgagc
aaacgccccgacgagggcatcggccacaagggcatcggcttcaagagcgtgctccaactc
accgccgcccccgagctgtacagcgtcgtcgggcccacctccaagtccttcgacggattc
tgcttccgcttcgcccgggacggcgacttcgaccggctcgccgaccaggtcgcgcccggt
cggccggaggccgtcggccaactgcgggccaatctcgcgtccttgaaggtgccggtcccg
gtggacgacatcccgaccgcggtggcgcccttccgtcggcgagggctggtgaccgtggtc
cggctcccgctgcgctccgccgaggcgaggcgggaggccgtacgccagctgcgcgaactg
accgacgacagggcgccgttcgaactcttcctggaccgcctcggaaaggtgtccgtgacg
caccgcgcgggcggccgacggcaccaccgcgtctacacccgcgcggtggacacgctcttc
accgcccgcggcctgaagatccagcagatcacgctgcgccgccgcacccgcctgatcatg
gtgacggccgccgtggacagcgagcgcgcgcacgaggccgtcgccgccggcctggggtcc
ggagcgctgaaggacggctggcaggcgctggccgactcggccgtggtcagcgtggcggtg
cccgccggcgagccgctggaacgcggcaggctgttcacgttcctgcccatgggggcggag
cggacctctccggtgcgcgggttcgtcaacgcccctttccacacggacgtgagccgacgc
accatgacggagtccacgcggtggaacgacctgctgctcgacaccgccgccgaggcctgc
gcacgggcggccgtcctggtcgacgaggggcgcgtcgagctgcccgcgggcgcactcctc
gacctcatctgctgggaacacgaccaactgccgcgcctggaagtggccttcaaggctcag
gaccgcgagttcgacgacgtgccgttcatgcccgtactgcacccccggggcgcccgtacc
tcgttccgtgagggctatgtgtggcgcggccccggccaggctcgcgtgttcaccccgcag
gccgtcgccgccgccggagtcccccacctgatcgacccgctgcttccctccccgcgtgtc
gagcggctggtcgcgctggggacggcccgcggactggacctccccccgcccgcctcggtg
gtcgccggctgggcggagcgtgtcgcggcaaccctcgccgagggggagttcgacgcgggg
acctgggcggactactaccacgacctctcggtctgcgtcgcccgcaccggcgagaagctg
aagggcaggaaggtcgtcctcacggccgacgggacaccggccccggccggcgccccgggg
ctgttcttccgccgcccggacggcggcacaccggtggcgcttcccgacctgccgcccgcg
ctcgcgcacagcatctccttcgtccacccggacatcgcctggacgggcaggaggaccagc
cggaggtcccgggcccgtgcctggctggaggaacaggggctggtgcgcgagtacagtccg
cccgcccttctggccgtgctgggcgaagccatgcacaaggaccgcggcaacgaaccggcc
ctgcgtgaacaccttctgttcgcgtgcgccctgtgggcgtcgtcgtccctggaccgcggc
ggcagagggcccgtgatcaaggggctgctggtaccgggccgcaacggctgggtgcccgcg
acggaagccatgttcggcgagggctggacgggcggccacagcgggatcggccgcaccctg
acccgcctgttggagcggaccgaaaaagtctcccggtccctggccaccgccgccgaccgg
gtcgtgcgccccgcccaggagatctgcgccggcacccgcaccgacgcccggacactccgc
cgctttctcgaacagcagggcgtccgccacggcctgccaccgacctacgtcaccacgttc
cagaccgtgaaagggcttcagctcaacgcccggtacagctttcccggcctgtgggcactg
gacctggactcggccgagaacacgcaatggcgttctgccgccgagcgatggcccaaccgg
cgccccgtgctctaccacaccgtcgactaccgtccgacacgcaggagggtggccctgctc
cccggccagcgcgagtacgccaccttcgacgaggagagccgacgcctgtacgcggagctg
atcgtccacggcctggaccactggcccggcgacgccctcgagttcagcttcgtgggcgga
accgaccggcagggcacgaaatggccgactccgctggcggccttcttgagcgaagcgcga
tggattccccaatcgggcgacgacgaggacgcccccgccttcgccacggccggcaccgtg
tggtggtggtcgggccaggaggagccgcccccgtacctcaccgtcgcctctgccgcgctg
cgcagccggcagtcggaccgtgtgctgacccgcctggagatgctcggcgtgcgccgctgg
gacgaccccgacaccgccgtggaccggctccgccacctgcccgacctgctgcgccgcatg
ccccggctccgccaggggcgttcggggcatctgctgggcagggcctacgagcaggcctgg
gcggaccttcttcccgcggacggcatcggtgtcgggtactccgagatcctcaccgaactc
ctggtgagccgagccggaacgctgggcgtgctcactgccgagtccgagtccgagtccgag
tccgaaccggtctacgtggccgacgtgcgcggcacacagcagcgcggactgctggaccgg
acgcccctgccccttctcccggtcgccgaccggcctctcggccagcgtgtccacgaccac
ctggaggaacagggccgtttcgccgtccggcggacgagcgaggccgagctcgacatcctg
gtcgaccgactgccgatcgccgaagcgcaccaagtgccgctcctcgccctggccggacct
tggctggagatcctcctgaccgcgctggtggagttcgacgaggaccgctccgcccgagcc
agggtcccctcggcgcgtcaggtcgggcaacggctgcgggcctgtggagtcgtcgtggca
cggaccgcggtcacacggatcgccggccacgcgctcgacgactccggcgacgaccgctcg
ctcctgcacgacgacccggacgagcctcgcctcgtcgtcgtggtcggtgagccgcagccc
tccgactggcacgtactggagaccgccgcgaccgccctgagcaccttgatcggcgccccc
tacctgagcgagtcggtacggctgcggttcatcgatctggcacgcagaggccggagcgtc
gaggacgtcaccgagtcggacatcgccgccgtactcggcatcccgcggcagcgcctggag
gcggtcctcgccgaccgtgcctcgatccgctccggcagcgcccggctggtcccgctgctc
gcctgcgtcgacctcgccctcgccgaggaactgcaacgggcgcaggagaccctgcacgac
cgcggcgaactccacgactggctggtcgcccggctcgacctcgaccgcgccgaccagttg
ctggggcttgtggaggagagcgactggcggtccaaactgtctgccctggacgtgcggctg
gacgatgccaaccgagcctggcggacgatgggcctgccgaccgtcgacaactcggagacg
catcgacgtcagttccaggcctggctccagcagcacagggcccgactgctcgaccgcgtc
cgggacgcgcacacgacggcgcacaaggcgggcggctccctcacggcgtacgtacgactc
cggtcgctccccgggctggagccggaccccggatggggactcacccactgggacctctcc
gccgacctgctcgacgcccacgccgaggcatgggcggccacacacctgcccccggcgccg
gtgcggcagcagccgtcgcgtccggtggccgaggtccaggaggagtgcgtcgacaccgtg
cacgcgcgctttccccacctgcgcgcccggatcacggcctggctcgaccgtcagggccgc
gaggtccccgcgctgccgtcggccggcgaggtcgcgtcggcgatgggcgccgaggggctg
ctcgacttcgagccgatcggctcccgcacgctgatcgcctggctacgggcacgcggccac
tggcccgaggacatgcccgccaccggcagagcggccgacctgggcctgaacgacccggca
ccgcccgccccgagcccggccgcccccggcagcgccccgcgccccaccgccccgggcccg
tcgctcctcctcaacggccgcgccgttccggtcggcccggaccacctgcgcgacctggca
cgccaggtggccgccgacctcacccccgaccaactcgccgccgccccacacccccgcaca
ccgtccacgtccgcccttcccaggcaacgcaccgcctccgcgcgggaggcgcgcggcggt
gcctaccgggcccctgcccgtgacacgcagaaggacctggccgtcggcctcgcgggggaa
gtgaccgtgggcgcctggctggagcgacagttcggcgttcctcccgaggagtcctggaag
tcccccctgcgccgccacgtgttcgccgacggctccggcgacgaccggctcggctacgac
ttcctgatccacgacagggaccagacgctcctgtacgaggtgaaggcctccgcccacgac
cgttgcgaattcgaactcggcgagtccgaggtcgcccgggcgagccgccttggacccgac
gagacctacgtcatcgtccacgtctcccacgtcctggacggcacccgccgccgcatcacg
cccctgcccaaccccttcggcgcccccggcctcgccggctaccacctcatcggcaccgcc
atgcgcctgcgcttcgacctccccccggaacaggggtga
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