Streptomyces lincolnensis: SLINC_4482
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Entry
SLINC_4482 CDS
T04801
Name
(GenBank) transcriptional regulator
Organism
sls
Streptomyces lincolnensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
BTAD
TPR_10
TPR_1
TPR_2
NB-ARC
TPR_8
TPR_7
Trans_reg_C
AAA_16
AAA_22
TPR_5
SNAP
TPR_16
NACHT
TPR_19
TPR-S
Foie-gras_1
TPR_14
TPR_4
Motif
Other DBs
NCBI-ProteinID:
ANS66706
UniProt:
A0A1B1MDJ6
LinkDB
All DBs
Position
5336108..5339176
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AA seq
1022 aa
AA seq
DB search
MEFEIRLSGSVEIRAAGHRSDLGSTKTRVTLAALAWDAGRTVSVDTLIHRIWDEHPPAKA
REALHAHISRIRGSLRIAGDHMPAIVSRTNSYCLEIDPDQVDLRCYTSCVERARSLRERR
DEEAALRLLDRAEGLWHGEPLAGIAGSWAEHLRVTIGETTLVAAMTRAEILFDAGKFADA
VPVLLPLAEAHPVDEALAEQLAVALYGSNRTAEATRLLQRTRQRVVRDIGLDAGRGLHRV
HQGILAGNPAAALLSRAGAEERTAPPPTRRVPDNLPRDVPWSGRRDELRRLTAALCEERG
ASDVVTVEAIHGMGGVGKTGLALHLAHRLRDRFPDGRVFLHLGGSSTDRTPLTPARALAE
LLRLLGVPAKELPHQLDELVALWRSTARDRRMLVILDDATSSDQIRPLLPGASPTAVVVT
SRRRLPGLPGVRPVSLDVLPPVDAVALFRQRLGGGRDTDSSDVAEIVRICGYLPLAVEIA
ASRLLARASWTTSDLLRQLGGGRGHLSQLHDSDRTLTHVFAVSYDALNAEQQLVFRRIGL
HVGVEFGPRAITALTGFSLDKAERVLEELLSHHLVSEPVPHRFIMHDLLRDYARSLIEAA
DSEDDVRQAVQGLVDHYVHAADRADRLAYPFRSRTELDADDPAIPSCPGIVDAQSAEQWL
ITESANLLDTLGWIAKHGSEYQLALSVHVLAGFLDMEGHLSVAEPLLRRAAAHWKAAGDS
AARVRALLDLCAVRTHGSRYDEAISAAREALDVMRSLPDRGLEAECIHQLSVPLWQTGQY
AQARSLQKTSMNFLLRTNDLLRIARCRNLLGITHLHLAENEEALACFTSALADFTEIGDE
RGRYSALNNMAELYKRTGRPADAEAAYRKAMVVADRMGNPRDRATLQMNLASVLDVLGRT
DEALALYGLVLPVLRAVGDRRAEAIALTGIGRAYRAAGRTEEALRQHIAALEMTRAIRAA
GDEVNVLYDLALAERDAGHAALAVVHLEESLTLSRSMGASVEEARAAEALAELRGEVTAQ
SR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
gtggagttcgagatcaggctttcgggatcagtggagatccgggcagcgggccaccgcagt
gatctcggatcgacaaaaaccagggtgacgcttgccgccctcgcctgggacgcgggccgc
acggtgagcgtggacaccctgatccaccgtatctgggacgagcatccgccggccaaggcc
agggaagcgctccacgcccacatctcacggatccgaggctccctgcgcatcgccggggat
cacatgcccgcgatcgtcagtcgtacgaactcgtactgcctggagatcgatccggaccag
gtggatctgcgctgctacacgagctgcgtcgagcgggcccgttcgctcagggagaggagg
gacgaggaagccgcgctgcgactgctggaccgggcggaggggctgtggcacggcgaaccg
ctggccggtatcgccggatcatgggccgagcatctgcgcgtcaccatcggtgagaccacc
ctcgtggccgcgatgacccgagccgagatcctcttcgacgcagggaagttcgccgacgcc
gtacccgtccttctgccgttggccgaggcccatcctgtggacgaggccctggccgaacag
ctggccgtagccctgtacggcagcaaccggacggccgaagcgacccggctgctccagcgg
acgcggcagcgtgttgtccgtgacatcggtctcgacgccggccgggggctgcaccgggtt
catcagggaatcctcgcaggcaaccctgcggcggctctgctctcccgcgccggagccgag
gagaggacggcgccgccacccacgcgccgggttcccgacaacctgccgcgcgacgtcccg
tggtcgggacgacgggacgaactgcgacggctcaccgcggcgctctgcgaggaaagagga
gcctcggacgtggtcaccgtcgaggcgatccacggcatggggggcgtcggcaagaccggc
ctggctctccacctggcccatcgattacgggaccgtttcccggacgggcgcgtcttcctc
cacctgggcgggagttcgaccgaccggacaccgctgaccccggcccgggcactcgccgaa
ctgctgcggctgctcggtgtgcctgccaaggaactaccgcaccagctcgacgagttggtc
gcgctgtggcgctcgacagcgcgtgaccgccggatgctggtgatcctcgacgacgcgacc
tcctccgaccagatccggcccctgctcccaggggcttccccgacagcggtcgtcgtgacc
agccgccgtcggctgcccggactgcccggagtgcggccggtctccctggatgtgctgccg
cctgtggacgcggtggcgctcttcagacagcggctggggggaggacgcgacaccgattca
tcagatgtggccgagattgttcggatatgcggttacctcccgctggccgtcgagatcgcg
gccagccgcctgctcgcccgtgcctcgtggaccacgtccgacctgttgcgtcagctcggc
ggcggccgtggccatctgtcccaactacacgattccgacaggacgttgacgcatgtcttc
gcggtctcgtacgacgctctgaacgctgagcagcagctggtcttccgccgtatcggactg
catgtgggggtggagttcgggccgcgtgcgatcaccgcgctcaccggattctccttggac
aaggccgaacgagtactcgaggaactcctctctcaccacctggtctccgagcccgttcca
caccgtttcatcatgcatgatctgctgcgcgactacgcgcggtcgttgatcgaggccgcg
gattccgaggacgatgtccgacaggccgtacaaggccttgtggatcactacgttcatgcc
gcggaccgggcggaccggctggcctatcccttccgttcgcgcacggaactcgacgccgat
gatcccgccatcccgtcctgcccgggaatcgtcgatgcgcagtcggcagaacagtggctg
atcaccgagtcggccaatctgctggacactctgggctggattgcaaagcatggctcggaa
tatcaactcgccctgtctgtccatgtgttggcgggatttctggacatggagggacacctc
tccgtggcggaaccgctgctgcggcgtgccgccgcccactggaaggccgcaggtgacagc
gcggccagggtgcgggccctgctcgacctctgcgcggtgcgcacccacggctctcgctat
gacgaggcgatctcggccgctcgtgaggcgctggacgtcatgcgctctctgccggaccgg
gggctggaggccgagtgcattcaccagctctcggtgcccctgtggcagacgggccagtat
gcacaggctcgatcccttcagaaaacctcaatgaattttctcttgcgaacaaacgatctg
ctgcggatagcgcgctgtcgtaatttactgggaataacacatctccatctggcggagaac
gaagaggcgttggcttgctttacttcggctctcgctgatttcacggaaataggagacgaa
cgtgggcggtacagtgcgctgaacaacatggcggaactctataagaggacagggcgcccg
gcggatgcggaagcggcttatcggaaggcgatggtcgtggcggatcgcatgggaaatccg
agagacagggccacgctccagatgaacttggcgtccgtcctggacgtgctcggcagaact
gatgaggccctcgccctgtacggcctggtcctgccggtgctgcgggctgtcggagaccgg
cgcgcggaggccatcgccctcacgggtatcggcagggcgtaccgtgccgccgggcgcacg
gaggaggccctccggcagcacatcgccgcacttgagatgacacgtgccattcgcgcggcg
ggcgacgaggtcaacgtgctctacgacttggccctggctgaacgggatgcgggacacgcg
gctctggccgtggttcacctggaggagagcctgacgctcagcaggagcatgggagcctct
gtggaagaggcccgtgccgccgaggctcttgccgaacttcggggcgaggttaccgcgcag
tcaagatag
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