Sideroxydans lithotrophicus: Slit_0403
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Entry
Slit_0403 CDS
T01196
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slt03016
]
Slit_0403
Enzymes [BR:
slt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
Slit_0403
Transfer RNA biogenesis [BR:
slt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Slit_0403
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GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Phage_tail_2
Motif
Other DBs
NCBI-ProteinID:
ADE10644
UniProt:
D5CM30
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All DBs
Position
409471..410187
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AA seq
238 aa
AA seq
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MRPSQRKHDQLRAIRITRHYTKHAEGSVLIECGDTKVICTASVEERVPPHKKGSGEGWVT
AEYGMLPRSTGERMSREAAKGKQSGRTQEIQRLIGRSLRAVVDLGKLGERTVTLDCDVIQ
ADGGTRTASITGAFVALSDAVAALMQQGLVKENPLKHAVAAISVGIYQGIPVLDLDYLED
SDCDTDMNVVMLGNGHFVEVQGTAEGHAFSREEMDTLLELAKHGITQLVAMQQKALQG
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccagtcagcgtaagcacgaccagctgcgtgccatccgtatcacccgtcattac
accaagcatgccgagggttctgtgctcatcgagtgcggcgacaccaaggtcatctgtacc
gccagcgtggaagagcgcgtgccgccgcacaagaagggcagcggcgaaggctgggtgact
gccgaatacggcatgctgccgcgttccaccggcgagcgcatgagccgcgaggcggccaag
ggcaaacagtccggccgcacgcaggagatccagcgcctgatcgggcgcagcctgcgcgcc
gtggtcgatctcggcaagctcggcgagcgcaccgtcacgctggactgcgatgtgatccag
gccgacggcggcacccgtactgccagcatcaccggcgctttcgtggccttgagcgatgcg
gttgcggcgctcatgcagcaagggctggtgaaggagaatccgctcaagcacgccgtcgcc
gccatttcggtcggcatctaccagggcatcccggtgctcgatctcgactacctggaagat
tcggactgcgataccgacatgaacgtggtgatgctgggcaacggccacttcgtcgaagtg
cagggtactgccgaaggacatgccttctcgcgcgaggagatggacacgttgctggaactg
gccaagcacggcatcacgcaactggtggcgatgcagcagaaggcgctgcaaggctga
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