Sideroxydans lithotrophicus: Slit_0475
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Entry
Slit_0475 CDS
T01196
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00300
Lysine biosynthesis
slt00470
D-Amino acid metabolism
slt01100
Metabolic pathways
slt01110
Biosynthesis of secondary metabolites
slt01120
Microbial metabolism in diverse environments
slt01230
Biosynthesis of amino acids
Module
slt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Slit_0475
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Slit_0475
Enzymes [BR:
slt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Slit_0475
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADE10716
UniProt:
D5CMA2
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All DBs
Position
481358..482659
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AA seq
433 aa
AA seq
DB search
MTEYFHYQQDQLYAEKVALSEIAQRFGTPCYVYSRAALTDSYRQFAEALKSRDHLICYAV
KANSNLAILNLFARLGAGFDIVSGGELQRVLAAGGAASKVVFSGVGKSEAEMRQALEAEI
LCFNVESAPELDRLNALAGSMGKVAPVSLRVNPDVDAKTHPYISTGLKQNKFGVAYTEAL
ELYRKAAAMPNLRVTGMDCHIGSQLTETSPFIAAAEKVLALVDKLAAAGITLEHLDLGGG
LGIRYDDETPPSIAEYGKALLAVLQGRSEKLIVEPGRVLVGNAGVLLTRIEYLKHGEEKN
FAIVDAAMNDLMRPALYDAWHAILPVQRRQNAPLSNSLPQAGERTSEKSNSQIYEVVGPI
CETGDFIGHAREMAVDKGDALAVMSAGAYGMSMSSNYNTRPRAAEVMVDGAVVHLVRERE
TVRQLYASEKIVA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatacttccattaccagcaagaccagctgtatgccgagaaagttgcgttgagc
gagatcgcccagcgcttcggcacgccatgttacgtctactcgcgtgcggcattgaccgat
agctatcgccagttcgccgaggcgctcaagagccgggatcaccttatctgctatgcggtg
aaggccaattccaatctcgccatcctcaatctgttcgcccgcctgggggccggcttcgac
atcgtctccggcggcgaactgcagcgtgtgctggctgcgggcggggcggccagcaaggtg
gtgttctccggcgtcggcaagagcgaggccgagatgcgccaggcgctggaggcggagatc
ctctgcttcaacgtcgagtcggcgcccgaactggaccggttgaatgcgctggcaggcagc
atgggcaaagtggcgccggtcagcctgcgcgtgaatcccgatgtggatgccaagactcat
ccatatatctccaccgggctgaaacagaacaagttcggtgtggcttataccgaagcgctg
gagctgtatcgcaaggctgcggcgatgccgaacctgcgcgtcaccggcatggattgccat
atcggttcgcagctcaccgagaccagcccgttcatcgcggcggcggagaaagtgctggcg
ctggtggataaactggctgcggcgggcatcacgctggaacatctcgatctgggcggaggc
ctcggtatccgctacgacgacgagacgcccccttccatcgccgagtacggtaaagccctg
ctggcagtgctgcaaggccgttccgagaagctcatcgtcgagccgggtcgagtactggtc
ggcaatgcaggggtgctgctgacgcgcatcgaatacctcaagcatggcgaagaaaagaac
ttcgccatcgtcgatgcggcgatgaacgacctcatgcgcccggcactttatgatgcctgg
cacgcgattttgccggttcagcgcaggcaaaatgcccctctctctaactctctcccgcaa
gcgggagaaaggacaagcgagaaaagcaattctcaaatttatgaggtggtcgggccgatc
tgtgagaccggggatttcatcggtcatgcccgcgagatggccgtggataaaggagatgcg
ctggccgtaatgtcagccggagcatacggaatgagcatgagttccaactacaatacgcgt
ccgcgggctgccgaagtgatggtcgacggagcggtcgtgcacctggtgcgggagcgcgaa
acggtgcgccagctctacgcttcagagaaaatcgtcgcgtga
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