Sideroxydans lithotrophicus: Slit_2411
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Entry
Slit_2411 CDS
T01196
Name
(GenBank) DNA polymerase III chi subunit HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt03030
DNA replication
slt03430
Mismatch repair
slt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Slit_2411
03430 Mismatch repair
Slit_2411
03440 Homologous recombination
Slit_2411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slt03032
]
Slit_2411
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_2411
Enzymes [BR:
slt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Slit_2411
DNA replication proteins [BR:
slt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Slit_2411
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Slit_2411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
DUF35_N
Motif
Other DBs
NCBI-ProteinID:
ADE12637
UniProt:
D5CMG5
LinkDB
All DBs
Position
2434516..2434935
Genome browser
AA seq
139 aa
AA seq
DB search
MTKVDFYTGSEDKLRTACQLSHKAMQNGLRVLLHAPDEATADKLDQLLWHYPPTAFMPHC
HSHEADAATLPVVIGRDEAFPHSELLISLHNACLPFFSRFERVIEIVSQDDADAKLGRER
YVFYKDRGYELRHFDLRKT
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagtagatttctataccggcagcgaagacaagctgcgcaccgcctgtcagctg
agccacaaggcgatgcagaacggcctgcgcgtgctgctgcacgcacccgacgaggccact
gccgacaagctggaccagctgctgtggcattacccgcccaccgcattcatgccgcactgc
catagccatgaagcggatgccgccacgctgccggtggtcatcggccgcgacgaggcattt
cctcattccgagctgctgatcagcctgcacaacgcctgcctgccgttcttcagccgcttc
gagcgcgtcatcgagatcgtcagccaggatgacgccgatgccaaactgggacgcgagcgc
tatgtcttctacaaagaccgcggctacgagctgcgccacttcgacctgcgcaagacatga
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