Sander lucioperca (pikeperch): 116037115
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Entry
116037115 CDS
T07345
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sluc00535
]
116037115 (optc)
Proteoglycans [BR:
sluc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
116037115 (optc)
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GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
116037115
NCBI-ProteinID:
XP_031136774
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Position
6:complement(42900786..42910360)
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AA seq
328 aa
AA seq
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MSLQSLMMAFAMVLVFLGPHPSMAAPPGEPDDEAFDLENYDLTSEMDWENLDANIYGDSY
DYDDLDQEIEVGTVAPETPPPANQPTAEHYEEELTLPTLPPAPVTLDFKGPGLFGPETGL
GMPTCLLCVCIRGSVYCDDMGLDQIPPLPKDTTHLYGRFNKIRHVKNTDFINLNKLQSID
LTGNQISGMDEDVFRSLPQLKELLLADNNLQVMPELPVTMKHIDLRNNRLISRGVHSEGF
KDMSQLEFLYMSNNNLDYIPTPLPLGLRVLHLQNNNIQSLHEDTFCNSHDRNFIRRNLED
IRLDGNPLNINLFAQAYVCLPRLPVGSH
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcagtctctgatgatggcctttgccatggtcctggtcttcctgggcccccac
cctagcatggcagcccctccaggtgagccagatgatgaggcttttgacctcgaaaactac
gacctgaccagtgaaatggactgggagaacctggatgccaacatttatggagacagttat
gattatgacgacttggaccaagagattgaggtgggcaccgtggcaccagaaacccctcca
ccagccaaccagcccacagctgaacactacgaggaggagttgaccctgcccaccctgcct
ccagctcccgtcaccctggacttcaagggaccaggtctttttggccctgagaccggcctg
ggtatgcctacctgcctactgtgtgtgtgtattcgtgggagtgtgtactgtgatgacatg
ggcctggatcagatcccacccctgcccaaagataccacgcatttgtatggccgctttaac
aagatccgacatgtcaagaacacagactttatcaacctcaataaactccagtccattgat
ctaacagggaaccagatctcagggatggatgaggatgtgtttcgctctctgccgcagctc
aaggagttactgttggctgacaacaacctgcaggtcatgcccgagctgccagtcaccatg
aaacacattgatctacgtaacaacaggttgatcagtcgtggggtacattctgagggattc
aaggatatgagccagctggaattcctctatatgtccaacaataacctggattacattcct
acaccactaccactgggcttgagagtgttacacctgcagaataacaacattcagtctctg
catgaggacaccttttgtaacagtcatgatcgcaacttcatccgccgtaacctggaggat
atccgtctggatggcaacccgctgaacatcaacctgtttgcccaggcctacgtctgcctg
ccacgcctgcctgtagggagtcactga
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