Sander lucioperca (pikeperch): 116041295
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Entry
116041295 CDS
T07345
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116041295 (zgc:91944)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116041295 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
Motif
Other DBs
NCBI-GeneID:
116041295
NCBI-ProteinID:
XP_031143048
Ensembl:
ENSSLUG00000013037
LinkDB
All DBs
Position
16:complement(3929753..3953548)
Genome browser
AA seq
504 aa
AA seq
DB search
MRQWCVPAATPRTEPLPGRLSVSPPPSDARMECCEAEPRYTIEQIDLLQRLRLSGMTKPQ
IIHALESLERLDPDHRPSHCDSQPAPSNNTPAAAAPAPSSSSSSSSSLSLASATTQTSGL
DGAALSPSNSYEASPPPLYPPSVAVQRSFSYDMMGEEDWDLEEKVEEYMRRDSNLVKEEI
KTFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNNPGLRWS
ESQHSVSPMPRARGGDRDGTVAGASGSLPNPNTNLNPNPNPVWSRQRELLMHLLPWYAAT
QTQPGATLSMRSLVKEEPDWRSGIMAGDRAGMVGGPLRLRRGSRFTWRKECQSIMESFFM
ENQYPDEAKREEIANACNSVIQKPGCKLSEFERVTALKVYNWFANRRKEMKRRANIEAAI
LESHGIEVPSPSCHSNGEDGEMQEFADQVNHRFSEQEETSSHRIVDHQDPSSLAPAEVAA
LPSPAPQVLDQKEEASKRETVDEE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgtgtccccgctgcgacccctcgcactgaaccactcccggggcgcctg
tctgtgtcaccccctccgtcagatgccagaatggagtgctgcgaggcggagccccgctac
accatcgaacagatcgacctcctgcagcgcctgcgtctgtccggcatgaccaaacctcag
atcatccacgctctggagtccctggagaggctggacccggaccaccgcccgtcccactgc
gactctcagcctgccccgtccaacaacacccccgccgcggccgcgccggccccgtcctcg
tcttcgtcctcgtcctcctcgctctccctggcgtccgccaccacgcagacctccggcctg
gacggcgccgccctgtcgcccagcaacagctacgaggcctcgcctccgcccctctaccct
cccagcgtggctgtccagcgctcgttcagctacgacatgatgggggaggaggactgggac
ctggaagagaaggtggaggagtacatgaggagagacagcaacctggtgaaagaagagatc
aaaacctttctcaacaatcgcaggatctctcaggcgatcgtaggccaagttacaggcatc
agccagagttacatttcccagtggttgctgcagcaaggcctggagatgagcgactccaaa
cgccgagctttctaccgctggtacctgctggagagaaataacccagggctgaggtggagt
gaaagccagcacagcgtgagtcccatgcccagggccaggggaggggacagagacgggacg
gtagcaggggcaagtggcagcctccccaaccccaacaccaacctcaaccccaaccccaat
ccagtgtggagcaggcagagagagctgctgatgcacttgctgccgtggtacgcagccacc
cagacccaaccaggggccaccttatcaatgcggtctctggtgaaggaggaacccgactgg
aggtcagggatcatggcgggcgacagagcggggatggtgggcgggcctctgaggctgcgt
agagggagcaggttcacctggaggaaggagtgccaatcaatcatggagagcttcttcatg
gagaaccagtacccagatgaagccaagcgagaggaaatcgccaacgcctgtaactctgtc
attcagaaaccaggctgtaagctgtctgagtttgagcgtgtgacggcattaaaggtgtac
aactggtttgccaaccgccggaaggagatgaagagaagagcgaatatcgaagctgccatt
ttggaaagccatggaatcgaggtgccaagtccaagctgccactcaaacggcgaggatgga
gagatgcaggagtttgccgatcaggtgaatcatcgattctccgagcaggaggagacatct
tcccacaggattgttgaccatcaagacccctcctcattggctcctgccgaggtggcagcc
ctgccgagccccgcccctcaggtcctggatcagaaagaggaggcttcaaaaagggagact
gtggatgaagagtga
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