Sander lucioperca (pikeperch): 116054141
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Entry
116054141 CDS
T07345
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1
KO
K13129
survival motor neuron protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116054141 (smn1)
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
116054141 (smn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
DNA_PPF
Mn_catalase
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
116054141
NCBI-ProteinID:
XP_031161358
Ensembl:
ENSSLUG00000009765
LinkDB
All DBs
Position
2:complement(36522984..36529379)
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AA seq
283 aa
AA seq
DB search
MANGCKDVLFSRGSGQSDDSDIWDDTALIKAYDKAVATFKTALKGEDEPEASKKNQPGKK
RKNNKKNQSRKRTNAPPDKEWQVGDSCSAYWSEDGQLYAATISSIDEKKGTCVVVFTGYG
NEEEQNLEDLLSEISEGDEETNIKVKETESSTEESDRSTTPSQHKQQPHSKAQKSKAHRE
PPPMCGPGFPGFPPGPPPMHAFRPGGNKRSGGHGPVPPSWPPMMPFGPPMIPPPPPMSPD
MVDDEALGSVLISWYMSGYHTGYYLGLKQGRKEAANWTKLHHK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggatgtaaagacgtgttgttttcacgtggaagtggacagagtgatgattcg
gatatatgggatgacacagcattgataaaggcatatgacaaggcagttgcaaccttcaag
actgcccttaagggtgaagatgagccggaagcctccaagaaaaaccaacctggaaaaaaa
cgcaagaacaacaaaaagaaccagagcaggaaaagaaccaatgcaccaccagataaagag
tggcaggttggggactcgtgcagtgcgtactggtcagaggacggccagctctatgcagcc
accatctcctccatagacgagaagaagggcacttgtgtagttgtttttacaggatacggc
aacgaggaggagcagaaccttgaggacttgctttcagagatttctgagggggacgaggaa
acaaatatcaaggtaaaggagaccgaatcgtcaacagaggagagcgacaggtcgaccaca
ccaagccaacacaagcagcagccacacagtaaagcccagaagtccaaggcccacagagaa
cctcctcctatgtgtggccctggtttccccgggttccctccaggcccccctcccatgcat
gctttcagaccggggggaaacaagcgatctggtggtcacgggcctgtacctccttcctgg
cctcccatgatgccgtttggtccaccaatgatccctccacctccaccgatgagcccagac
atggtggatgacgaggctttgggcagcgtgctcatctcctggtacatgagtggatatcac
acaggatactacttggggttgaaacaaggacgcaaagaagctgccaattggacgaaactg
caccacaaatga
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