Sander lucioperca (pikeperch): 116056242
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Entry
116056242 CDS
T07345
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12012
tripartite motif-containing protein 35
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116056242
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116056242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
U-box
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
zf-rbx1
zf-RING_6
PEHE
Gp58
zf-Nse
DUF4618
zf-ANAPC11
Perilipin
PI3K_P85_iSH2
HisK-N-like
Motif
Other DBs
NCBI-GeneID:
116056242
NCBI-ProteinID:
XP_031164259
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Position
15:complement(4393790..4401957)
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AA seq
464 aa
AA seq
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MASMSEEDFCCSVCHEVFRDPVVLSCSHSFCKDCLKSWWTEKPTQECPVCKRRSSKSEPP
RNLELKKLCESFLQQRDQRASEALCSLHSEKLKLFCLDHQQPVCLVCLHSEKHSNHIIRP
IDEAARQHKKKLQETLEPLKGKLKVFEQVKVKFDQTAEHLKVQARRTEMQIKDQFKKLHQ
FLEEEEEARMAALREEEEQKSQRMKEKMEALSREIAALSDTVRATEEQLRAEDVSFLINY
KAAVERVQQRPLLDDPQLLSGALIDEAKHLGNLSFNIWNKMKDMVSYTPLILDPNTAYPK
LILSEDLTSVRLGGERQKLPDNPERFDYHPSVLGSEGFNSGTHSWDVKVGDSTYWMQGVL
AESVQRKGVIQSGLWTMLFFKGEYSAWSPPAPPTDLPFKKQLQRIRVTLDWNRGKLSFSD
PDTNTHIHTFTHTFTERVFPFISTGDKVPLKISPLKVCVTKQQV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatgtcagaggaggatttctgctgttctgtctgtcatgaagtctttagagat
cctgttgttctgtcatgtagtcacagcttctgtaaagactgtctgaagagctggtggaca
gagaaaccaacacaggagtgtccagtttgtaagagaagatcttcaaagtcagaaccacct
cgtaacctggagttgaagaagttgtgtgagagtttcttacagcagagagatcagagagct
tcagaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcag
cagccagtgtgtctcgtctgtctacattcagaaaaacactccaaccacataatcagaccc
atcgatgaagctgcacgacaacacaagaagaaactccaggaaactctggagcccttaaag
gggaaattaaaggtttttgaacaagttaaagtgaagtttgatcaaacagcagaacacctg
aaggtccaggcccgacgcacagagatgcagattaaggatcagtttaagaagcttcaccag
tttctagaagaggaagaggaggccaggatggctgcactgagggaggaagaggagcagaag
agtcagaggatgaaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggagcagctgagagctgaagacgtctcattcctgatcaactac
aaggctgcagtggaaagagtccagcagcgccccctgctggatgatccacagctgctctca
ggagctctgatagacgaggccaaacacctgggcaacctgagcttcaacatctggaacaag
atgaaggacatggtctcctacactcctctgatcctggacccaaacactgcttatccaaaa
ctcatcctgtctgaagatctgaccagtgtgagactaggaggagagagacagaagcttcct
gataatccagagaggtttgattatcacccctctgtcctgggctctgagggctttaactca
gggactcacagctgggacgtcaaagttggagacagtacatactggatgcagggtgtgtta
gcagagtctgtccaaaggaagggagtcatacagtctggattatggactatgttgttcttt
aaaggtgaatactcagcatggtctccaccagctccacccactgatctcccgtttaagaag
cagctccaaaggatcagagtgactctggactggaacagaggaaagctgtcgttctctgat
cctgatactaacacacacatacacaccttcacacacactttcactgagagggtgtttcca
ttcattagcactggggataaagtcccactgaagatatcaccactgaaggtctgtgtgaca
aaacaacaggtctga
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