Sander lucioperca (pikeperch): 116060518
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Entry
116060518 CDS
T07345
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116060518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116060518
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116060518
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116060518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf-UDP
zf-ANAPC11
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
116060518
NCBI-ProteinID:
XP_031169971
Ensembl:
ENSSLUG00000015771
LinkDB
All DBs
Position
4:complement(39701494..39741780)
Genome browser
AA seq
745 aa
AA seq
DB search
MANSNNMLLASVVVVWEWLNEHGRWRPYSPAVSHQIEAAIRSSDPRGGSVVLGQVDSRLS
PYIIDLQSMHQFRQDTGTIRPVRRSFYDPASAPGQGWQWEWENDAGTWTAYDMEVAIAIE
NAHSRQQPCLDLTPLGFCYLIDFQNMTQVNRQSQRCRRLQRRADMAYPLVSGPLPIPKGS
GAGGGITGALLGVGVSGASSFYSNGGLPATGLGQPCSCQQCMLVLSVKTNTGGAGVQTLG
RRSLTMQRPKNSAPIVSKPLSPSKSATLGRGQQQNSNSNSNYYQTLPHGLAISKNTASPR
RNAQLFAQSLAALTAGTSTLGISSSSNRPPPPSLPPPQPPSSNPNLIPPSILAKHSSSSA
NESVPTATLITPANSVTTPPSPVPSPSPMVMKPQRPPTSAATVCHAPLPPRSSLAGLSRP
ALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGITGILMSAAALPVCLTRPPKLV
LHPPPVSKSDIKPVPGFGHCCRKTTKKQARKGKTPEEVVKKYLQKVKSPPEEDCTICMEP
LGGPSGYKGPGVGPVSRAESVGRLAQCGHQYHFQCLVAMYNNGNKDGSLQCPTCKTIYGV
KTGNQPAGKMEYHVIPHSLPGHPDCKTIRIIYNVPPGLQGPEHPNPGKPFTARGFPRHCY
LPDSERGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGFPD
PGHLDNVLEELRAQGIIEDDGLMEK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagtaacaacatgctcctggcctctgtcgtggtggtgtgggaatggctgaat
gaacacggacggtggcggccctacagccccgccgtctcccaccagatagaggcggccatc
cggagcagtgacccccgcggagggagcgttgtactcggccaggtggacagccggctctcg
ccgtacatcatagatctccagtccatgcaccagttcagacaggacacaggaaccatccgt
ccagtgcggaggagtttttatgacccagcctcagccccaggtcagggctggcagtgggag
tgggaaaacgatgcaggtacgtggacggcctacgacatggaggtggccatcgccatcgag
aacgcccacagtcggcagcagccctgcctcgacctgacaccactcggcttctgctacctc
atcgattttcagaacatgacacaggtgaacagacagagccagaggtgtcggaggctgcag
agacgtgctgacatggcctaccctctagtgtctggtcctctcccaataccaaagggaagc
ggtgcaggaggaggcataacaggagccctgctgggtgttggggtgtcgggggcaagctct
ttctactccaatgggggcttaccagctactggattgggccaaccttgttcctgccagcag
tgcatgctggttcttagtgtaaagaccaatacaggaggagcaggggtacagactctaggt
agacgctcactaaccatgcagcggcccaagaactcggcgcccatcgtctctaaacctctg
agtccgtctaaatcagccactctggggcgaggacagcagcagaactccaactccaactcc
aactactatcagacgctgccgcatggtctcgccatctccaaaaacaccgcctctccaaga
aggaacgcccagctgtttgctcagtcgctggctgcactcaccgctgggacctccactctg
ggtatctcctcgtcttccaacaggccgcctccgccatccctcccgcctcctcagcctcca
tcatccaacccgaacttgatccctccatccattctggccaagcactcctcatcttcagcc
aacgaatcagtgccaaccgccacattaattacccctgccaacagcgtgaccacgccccct
tctcctgtgccatctccgtcgccgatggtgatgaagccacagcgcccaccaacgtccgca
gcaacagtgtgccatgccccgttgccaccgagatcaagcttagctgggctgagccgacca
gcgttacagaggattgcgatggcccagtccagagcgctcatagcatcaggtgtgcccacc
gtcccagtgaagaacctcaatggatccagtcctgttcaccctgcactggccgggatcaca
ggtatcctaatgagtgctgccgctctgccggtgtgtctgaccagacctccaaaactggtg
ctgcaccctccgcctgtcagcaagagcgacatcaaacccgtgccaggctttggccactgc
tgcaggaagaccaccaagaaacaggctcgcaagggtaaaactccagaggaggtggtaaag
aagtacctgcagaaagtaaaaagtccaccagaggaggactgtaccatctgtatggagccg
ttggggggtccgtctggttataagggtccaggagtggggcctgtgtctcgggcggagtca
gttgggcgactagcacagtgtggacaccagtaccatttccagtgtctggtggccatgtat
aataacggcaacaaggacggcagtcttcagtgtcccacctgtaaaaccatctacggcgta
aagacaggcaaccaaccggcagggaagatggagtaccacgtcatccctcactctctacca
ggacatcctgactgcaaaaccatacgcattatctacaacgtaccaccaggccttcaggga
ccagagcatccgaacccagggaagccattcactgccagaggctttccccgacactgctac
ctcccagacagcgagagaggacgcaaggtactgagactgctcctggtagcctgggaccgc
aggttgatcttctcagttgggacttcgagcactactggagaatctgacaccgtcatctgg
aacgaggtccaccataagacagagtttggctccaacctgacaggccatggcttccccgac
cccgggcacctcgacaacgtcctggaagagctccgagctcagggcatcatagaggatgac
ggactgatggaaaagtga
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