Sander lucioperca (pikeperch): 116062439
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Entry
116062439 CDS
T07345
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116062439 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116062439 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116062439 (g3bp1)
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
116062439 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
116062439 (g3bp1)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116062439 (g3bp1)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116062439 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
116062439
NCBI-ProteinID:
XP_031172970
Ensembl:
ENSSLUG00000011015
LinkDB
All DBs
Position
1:45128741..45140037
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AA seq
497 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDSNGKPVEAVYGQSE
IHKRVMALSFRDCHTKIRHVDAHATLNEGVVVQVMGELSNNMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESEDEVEEIEERVPSPDIAQEESAPFYDPTPCS
EPTVPGDEEEAAAESPEPEPEVEKEAEPTCVELKQETMLETQTDVNTSEDQTDKGPAAAP
PTSEPAAVPAEPTPAAPEENRPFSWASVTSKNLPPSGAVAVSGISPHVVKLPPTAPPRAE
VKSESQTPTQRPQRDQRPREQRPGGPPPVHRGPRPVREGEQGETEGRRVVRYPDAQQLFV
GNVPHDVDKTELKEFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILNNRPIKFRG
DVRLNVEEKKTRSAREGDRRDVRLRGPGGPGGPRERIGGGGGGPRGPPTRGGMAQKPSFG
SGRGAGPSEGRYPAQRQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctggtcgggcgagagtttgtccgacagtattac
acactgctgaaccaggcccccgactacctgcacaggttttatgggaagaactcgtcctac
gtgcacggcggcctggacagcaacggcaaaccagtagaggctgtttatggacaatctgag
atccataagagggtgatggctctgagtttccgtgactgtcacaccaagatcaggcacgtg
gacgcccacgccaccctgaacgagggcgtggtggtgcaggtgatgggcgagctgtccaac
aacatgcagcccatgaggaagttcatgcagacctttgtgctggcgcctgagggtaccgtc
gcaaacaaattctacgttcacaacgacgtgtttcgttaccaagacgaggtgttcggcgac
tctgattctgagcccccagaagagtctgaggatgaggtggaggagatcgaggagagggtt
ccctcccctgacatcgctcaggaggagtctgctcccttctacgacccgacaccctgttca
gagccgacggttcctggcgacgaggaggaggcggcagccgagagtccagagccagagcca
gaggtggagaaggaggccgagcccacgtgcgtggagctgaagcaggagacgatgctggag
acacaaacagacgtcaacacatccgaagaccagacggacaaaggccccgccgctgccccg
cccacctcagaacctgccgccgtgcccgccgaacccacccccgccgctccagaagaaaac
aggccgttctcctgggcgtccgtcaccagtaagaacctcccccccagcggggctgtcgca
gtctcaggaatctccccacacgtcgtcaaacttcctcccacagcaccgcccagagcggag
gtgaagtcggagtcccagacaccaacacagagaccacagagagaccagagaccgagggaa
cagaggcctggaggtcctccgccggtacacagagggcccagaccagttcgggagggtgag
cagggcgagacggaggggcgcagggtggtcaggtaccccgacgcccagcagctctttgta
ggaaacgtccctcacgacgtggacaagacggaactcaaggagttctttgaacagtatggt
acagtcctggagctgaggatcaacagtggagggaagctaccaaactttggttttgtggtg
tttgacgactctgaacccgtacagaagattctcaacaacaggcccattaagttccgcggc
gacgtccgcctgaacgtggaggagaagaagacccggtcggcccgcgagggcgacaggcgg
gacgtgaggctccgcggccccggcggtcctggcggcccccgagagcgaataggaggcggc
ggcggaggaccccgaggcccccccacccgcggaggcatggcacagaaacccagctttggc
tccgggcggggcgcaggccccagcgaggggcgctaccctgcccagcgccagtga
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