Sander lucioperca (pikeperch): 116065919
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Entry
116065919 CDS
T07345
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X2
KO
K20100
YTH domain-containing protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116065919 (ythdc1)
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116065919 (ythdc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
116065919
NCBI-ProteinID:
XP_031177432
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Position
14:complement(23844721..23863126)
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AA seq
663 aa
AA seq
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MAADRREDKDGELNVLEDILTEAPDQDDELYNPETERAVSDKKGTKRKSERSDSRDLKRL
RPSRSSSNKRGPPLSSSSKKVASSPRARHAAASYRHEYYEERKGRRGAREVTRSRAGEDA
RRREAQRGLEALSQKLRRASPSPQEEDNQSEGEAAEYGSEPGTGSSSPSASHAEEEEEED
HEEEEEEEEEGMEEEEEEEEEEEGEKEEEEEEYERRGGAEGNDYDTRSEAGDSRSASSVS
FSDDGESVHSGSASEASGSEKKQEKLSSSVRAVRKGMENPTSKLRYILRDARFFLIKSNN
HENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVVLVFSVRESGKFQGFARLASESHHGGS
PIHWVLPAGMNAKMLGGVFKIDWLCRRDLPFTKTAHLSNPWNEHKPVKIGRDGQEIQPDI
GAQLCALFPLDESVDIHQVARRVRHKRRTPSEPRPRGRPPQREPGRRRPEEYDLHGRKRP
RADGPPDFNQRAGFIQDLRNQPVDRRFSGMRRDVFLNGSYNDYMRDYHHSVGPPAPWQTL
AAYPGVEQPPPHHPPYYHHSHPPPPPHQAYHHHPLPPHEAPPPRFRDKQRAPPHRAFPSS
PHDYDMRVDDFLRRTQAVVSSRRERERQRERERGGPRRERERERGRDRDRERDRDKERGR
YRR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccggcgcgaggacaaagacggagagctgaatgttctggaagatattctg
actgaagctccggatcaggatgacgagctgtacaaccctgagacggaacgagccgtcagc
gacaagaaaggaaccaagaggaagagcgagcgttctgacagccgcgatctgaagaggctc
cgcccctctcgctcctcctccaataagagaggcccgcccctctcctcctcctctaagaag
gtggcgtccagcccgcgcgcccgccacgccgccgccagctaccgccacgaatactatgag
gagcgaaaagggcggcgaggggcccgagaggtgaccaggagccgtgcaggagaggacgct
cgccgcagagaagcccagagaggcctggaggctctgagccagaagttgcggcgtgcgagt
ccctccccccaggaggaggacaaccaatcagagggagaggcagcagagtacggctcggag
ccgggtacaggaagctcctcccccagcgcgtcccacgcagaggaagaggaagaggaggac
cacgaggaagaggaggaggaggaagaggagggcatggaggaagaggaggaggaggaagag
gaggaggaaggggagaaggaggaggaggaggaggagtacgagcgtcgtggaggcgccgag
ggaaacgactacgacactcgcagcgaggccggcgactctcgctccgcctcctccgtcagc
ttctctgacgacggcgagtcagtgcactcaggctccgcctccgaggcctcaggttcagag
aagaagcaggagaagctgtcatcatcagtccgagccgttcgcaaagggatggagaatccg
accagtaaactgcgctacatcctgcgagacgctcggttcttcctcataaagagcaacaac
cacgagaacgtctctctggctaaagctaagggcgtgtggtcgacgctgccggtgaacgag
aagaagctgaacgcggcgttccgctcggcgcgaagcgtcgtcctcgtcttctcggtgagg
gagagcgggaagttccaaggttttgcccgtttggcttcagagtctcaccacggcggctct
ccgatccactgggttcttcctgccggcatgaacgccaagatgctgggcggcgtcttcaag
atcgactggctctgcaggagggacctccccttcacgaagacggctcacctgtccaacccc
tggaacgaacacaagcctgtgaagattggacgcgacggacaggagatccagcccgacatc
ggcgcccagctctgcgccctgttcccattggacgagagcgtggacatccaccaggtggct
cgccgagttcgtcacaagcgccggacgccgtcggagccgcggccccgaggccgaccgccg
cagcgcgagccgggaaggcgtcgccctgaagaatacgacctccatggcaggaagcggccg
cgggccgacggtccgccggacttcaaccagcgagcagggttcatccaggaccttcgtaac
cagccggtggacagacgattctccggcatgagacgagatgtttttctcaacgggtcgtat
aacgactacatgagggactaccatcacagcgtcggcccccccgccccctggcagactctg
gcagcatacccgggcgtggagcagccgcccccccaccaccccccctactaccaccacagc
caccccccgccccccccacaccaggcctaccaccaccacccgctgcccccccacgaggcc
ccgccccctcgcttcagagacaagcagcgggcgcccccccaccgcgccttcccctccagc
ccgcacgactacgacatgcgcgtggacgacttcctgcggcggacgcaggcggtggtgagc
agccggcgggagcgcgagcggcagcgtgagcgtgagcgaggcgggccgcggcgagagaga
gagcgagagcgagggagagaccgagaccgagagagagaccgagacaaggagaggggccgc
taccgccgctga
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