Sander lucioperca (pikeperch): 116067546
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Entry
116067546 CDS
T07345
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116067546 (jmjd1cb)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
116067546 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
DUF3069
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
116067546
NCBI-ProteinID:
XP_031179883
Ensembl:
ENSSLUG00000021886
LinkDB
All DBs
Position
22:28117581..28261922
Genome browser
AA seq
2920 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDEPPEIGDFGRWPWRSGVIRAVNHRDSDNPDLTVYVEFDDQ
EWENREWVKVYEDFQLFLLEHQLVWAKRKEGAGGAGGAGSVLQGSKAKHIQWPALAFKPV
VGKSLLSSVTAVEFLLDRQLDFLSDHSAFQPYQDEVDSQNPVLRDNHQLHEEVRGWLKDQ
KVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDPS
MIQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNNTAHMAGGRPGGTTGNTQSHYTRAQA
NSPRPIMTSSGPNPKGSQGTLASQQQSQSQQCQQPASQSHHSPSGSGREQREQRNSRSSR
RKGSDSSVPEEDKDRREESTGRDSKSKAKQALNKRRKGEEEEKKAGLKRLKTDMTSDLSE
SSDSENPHNKRTSCSSSSSSSSSSSSSSSSSSSEPNSENELKTRSTDAKQSGVSKKEEEE
KPLMQATKMNNSSSLIGRLSPWVELQAAEDSKKGVLKETGKMTTKEEEELVAVTQITQSP
RQQTPLMSDTVQGGTMESSKNTVKASSRSQTPLLSHLGGSSVIDITDDAQATVHQESSEA
VSALLASQKAESTALSPYLPLNPSPVSSPPVPPSPSPSEGGRRTDIEPPMQQQQGIMGGG
MTAARSLGNKIEFAPSEVIRPVTSMVQNVVLVEKEKTVLPLHLHQQQQPQHHHHHHHHHQ
HTQQQQHYTSIHPGIKSPSLSEETRKHPQQPPTPHKMNTVLSPDLTKSRMSPNPAQLDSL
KQKPQHPNNSQSHPYANTNPADLLKAKPHPGLLDISKPKPNTSPEVSKHKIQRYPDTSPP
PIGRLSAKVEAAEPPRSGFKPVPARSESGGVGASVSSSTKSPLIIDKNETFTVYRDPALV
RSDAENSVSATVSSNHVAAYLHPHLHTLHSPSPHSPCLTSASHSHAASHLLAPPHTSALP
HPHLLPPGVLPAMPPPAASLLGGHPRLDSPSGLGHLALPHPAAAHQQQFLQGQGPPPPPL
LAQAHSGAAGLGLYPILWQYPNGTPTSYPPGLNLPPTAKWVHPENPVTVNSEASLRRNTA
SPWLHPGAGSAGDGLGLLSHVPVRPASADAHRPPVKINTHTHASPPLSKSSMNAHKEDVD
KKGFVDPIRTLTLAQLKQEQTDRSRTPTGKDVHLHRLYLDPHCKARQVNTQDAVQAADRA
SKYKEENRQILKESIEVAPFTAKIQRSSDPGMDRDRERSRDPAFPVRLPALASPGLKAGH
IHSHVIQSEKSNYFTTLSNSVVNEPPRLYPSKELSSYYEKVSGGAPGVVASVGANVPSQG
ALSLGSYSSKASLSKPPPLIKHQPEGGEGLAGKITEQLSQQVTLVQQQHSHHTGIDRIER
RSPAISPSSSMSLSSSSAPNHHHHHHHHHQQQQQQQQQQQHQQLRAMPSLHRAPVFHPPT
QHALERREAAEREREREKERERERERAAYGGRLSPPTLTPIQPVSLAAAGSKTSAEQQKP
PTLLPELRDVKGHGNAAVVTSVASAISGEIMTSSTDTWRGGEVIQERRCPFSGEKGVSRG
KPQSAMASVIVRPSTSIKYDSPPGANKSGAMLLKELPQGRFYPSKLQGECLRLGESVREA
VAGRVIQPNSNLDDMCVQYKNTYMRGMQGTMGASITNSVCRTAISAASAFGVQSISGTAI
SELGYSISARGEISAHNAGFGGRVLSHSGPGEYQEGLGSRNTSPGGSLPPSSPAGTPQPS
PSLTPTPSSISGSSQPYSSSFVHLKKHKAALAAAQSRSNFSTAPTSIATGNCFLPVDSVD
KTPIHNSPPPPPSQASSSSVDISGGISASGSTTTGKSSPLPNGQSSGPASTSSGQPSNYH
KLKKAWLTRHSEEDRNTTATVCSTNTKPEKLPSTTTTTTTSTSNTSAMAEMIKPCTVNLS
ASTSSEVEMSKDSASKVERERQLEEKVGGGGGEERKAAPSSRRGNKRSYESGSESGGDDS
DASESKMEGRAKRQPKPTYKKKQNDMAKKKGDNEKDEDDVKPNGIFRSAREKTKLKLASS
NGIPRSVLKDWRKVKKLKQTAESFLQDDSCAEIGPNLQKCRECRVVRSKKGEEPTHSPVF
CRFYYFRRLSFSKNGVIRMDGFSTPDQFDDEALALWVPGLMEESHLDQTTAKYILSFIGD
KFCQMVVTENTAATWVKKDAKLAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDC
YKAKERRSSKDKELYGWLKCVKGQPHDHKHLMPTQIIPGTVLTELVTSMHSLREKHNIKS
HCPCTNKQNLLTKLPATNGVSQVLQNVLNHSNKLSLVKAEPGSQQNSDQGGTKAETNGGR
GGGSSPGSDAGSAPVTPPESQSPLHFLADLAEQKSREEKKENKSVLLGKSVKEDKDGDSL
EVLQQCKTTSLVANSTEQGSTLRDLLTTTAGKLKLGSTDAGIAFAPVYSTASQTGKGGRT
MPNILDDIIASVVENKIPASRQSITTKLSIKQEPVAPGNNNNNNIPVPAITEDAKPDRKK
SAHVTAAVPEESTNQYPDIPHCWLNNRRLLWLKDHSNQNNWKLFRECWKQGQPVLVSGIH
KRLNGGLWKADSFNQEFADHQGDLLNCKDQVVSNSGIKEFWDGFEDITKRPKSKDGEPMV
YRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGNLNLASHLPSFFVRPDLGPRLCC
AYGVAASQDQDFGTANLHVEVSDVVSVLVYVGVAKGNGVLSKTGVLKRLEEEDLDEGVRR
RLKDSSETPGALWHIYLNKDMDKVREFLHKEQGLDVSLDQDPIREQGLYLSRKQRQRLLD
EHEVQGWTVVQFLGDSVLIPAGAMHQVQNLHSCVQVINDFVSPEHVANSFHLTQELRPNK
EEVNYEDKLQVKNILYHCVKEVVSSLKRASSEEDDEEENS
NT seq
8763 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcgcccggagctggtcgggaagcggttcctctgtgtcagcggggac
gagccgcctgaaatcggcgacttcggtcggtggccgtggaggtccggggtcatacgagcc
gttaatcatcgtgacagcgacaatcccgacctgacggtatacgtggagtttgacgaccag
gagtgggagaacagagagtgggtgaaggtctatgaggatttccagctgtttctgctggag
caccagctggtctgggccaagaggaaggagggagccggaggagcgggaggagcaggaagc
gtgctgcaaggatccaaggccaaacacatacagtggcctgccctggcgtttaagccagtg
gtggggaagagcctgttgtcgtcagtaacagcggtggaattcttgttagaccgacagctg
gacttcctgtctgaccattcggccttccagccataccaggatgaggtggacagtcagaac
ccagtgttaagagacaaccatcagctccatgaagaagtgaggggctggctcaaagaccag
aaggtgcaggaaatttttatgcaaggtccctattcattgaatggctaccgcgtgcgtgtg
tacagacaagactcggccacccagtggttcactggcatcattacacaccacgacctcttc
agtcgaaacatggtcgttatgaatgaccaggtgctagagcctcagaacgtggatccatct
atgatccagatgacctttctggatgatgtggttcactccctgctgaaaggagaaaacatt
ggcatcacttccagaagaaggtcacgatccagccagaacaacaacactgcccacatggcg
ggagggagacccggcgggaccactggcaacactcagagtcattacacacgagcccaagcc
aacagcccccgccccattatgacctcatcaggccccaacccaaaaggttcccaggggacg
ctggcctctcaacagcagagccaatcacagcaatgccagcaaccagccagccaatcgcac
cactcgcccagcggcagtgggagggagcagagagagcagcgcaactctcgctcctccagg
aggaaaggatccgacagcagcgttccagaggaggacaaggacaggagagaagagagcaca
gggagagactccaagtccaaggccaagcaggcgctgaacaaacgcaggaagggcgaggaa
gaggagaagaaggcaggtctaaagaggctgaaaaccgacatgacctctgacctgtcagag
agcagcgactcagaaaacccacacaacaagaggacctcatgctcctcatcctcatcatcc
tcatcatcctcctcctcctcctcttcttcctcctcctcagagcccaactccgagaatgag
ctaaagactcgcagcactgatgcgaaacaaagtggtgtttccaaaaaggaggaggaggag
aagccgctgatgcaggccaccaaaatgaataattcttcgtctcttattggtcgcctgtcc
ccgtgggtggagcttcaggcagcggaggacagcaagaagggcgtgcttaaggaaaccggc
aaaatgacaacgaaggaggaggaggagttggtcgcggtaacacagatcacccagtccccg
cggcaacagacgcctctgatgtccgacaccgtccagggcggcactatggagagcagcaag
aacactgtgaaagcgtcatctcgatcccagacaccattgttgtcccacctgggaggcagc
agtgtgatcgacatcacagatgatgcccaggccacagtgcaccaggagagttcagaggca
gtgtcagccctgctcgcctcccaaaaggccgagtccacggcactctcaccttacctcccc
ctcaacccctcccccgtctcctcgcctcctgtccctccatctccctcaccatcagaagga
ggccgcaggacggatattgagcctcccatgcagcagcagcagggcattatgggaggtggc
atgacagcagccaggagcttaggcaacaagatagagtttgctccctctgaggtcatcagg
cctgtcacatcgatggttcaaaatgtggtgctggtggagaaggagaaaactgtccttcct
cttcatcttcatcaacagcagcagccgcagcatcatcatcatcatcatcatcatcatcag
cacacacaacaacagcaacactacacatctatccaccccggcattaagagcccgtctctg
tccgaggagacgagaaaacacccacagcaaccaccgaccccccacaagatgaacacagtc
ctctcccctgacttaaccaaatctagaatgagccccaacccagctcagcttgactctctc
aaacagaaaccccagcaccccaacaactctcagagccatccctacgccaacacaaaccca
gctgaccttctcaaggctaagccccacccaggcctgctcgacatctctaaacctaaaccc
aacacctcccccgaggtctctaaacataaaatacagaggtaccctgatacctccccacct
ccgataggccgtttgtcggctaaagtagaagcagctgaacccccgcggtctggtttcaag
ccggtgccggctcggtcggagtcagggggagtcggtgcgagcgtcagcagcagcaccaag
agtcctctgatcatcgataagaacgagaccttcaccgtttacagggacccggcgctggtc
cgctcagacgcagagaactctgtctcggccaccgtctcctccaaccacgtggcagcctat
ctccacccccacctgcacacccttcattccccctcccctcactccccctgtctcacttcc
gcatcccactcccacgccgcctcccacctcctcgccccccctcacacctctgccctgcca
cacccgcatcttttaccccccggagtgctcccggccatgcctcctcccgcagcatctctc
ctcgggggccaccctcggcttgactcccccagcgggttgggccacctcgccctgcctcac
ccagcagccgcacaccagcagcagttcctacagggtcagggccctcctccaccccctcta
ctagcccaggctcacagcggggcagcagggctgggcctttaccccatcctctggcagtac
cccaacggaacaccaacctcctaccccccagggctcaacctgccccccacagctaagtgg
gtccacccggaaaatccggtcaccgtgaattccgaggcctctctcaggaggaacacagcc
agtccgtggctgcacccgggtgccggtagtgctggcgacggtctgggtttgctgagccac
gttcccgttcggccagccagcgcagacgcccaccgccccccggtcaagatcaacacccac
acccacgcaagccctccgctgtcaaagtccagcatgaacgcccataaagaagatgtggat
aagaaaggcttcgtggacccgatcaggacgttgacattggcccagctgaaacaggagcag
acagacaggagtcgaacccccacagggaaagacgtccacctacaccgcctctacctggac
ccccactgcaaggctcgccaggtaaatacacaggatgcggttcaggcagcagaccgagcc
agtaaatacaaagaggagaatcggcaaatcctgaaagagagcatcgaggtcgctcccttc
accgctaagatccagcgctccagtgacccggggatggatagggaccgagagaggagcaga
gatccagccttccctgtgcggttaccagctcttgcttccccaggcctcaaggccggccac
atccattctcacgtcatccagtcagagaagagcaattacttcaccacgctgtccaacagt
gtagtgaatgagcctccaagactttacccctccaaggagctcagctcttactatgagaaa
gtgtctggcggagctccaggggttgtggccagtgtcggcgccaatgtgccaagccaggga
gctctatccctgggcagctatagctccaaagcctccctctccaagccccctcccctcatt
aagcaccagccagagggaggagagggtttagcagggaaaatcactgagcagctcagccag
caggtgacactagtccaacagcagcattcgcaccacacaggtatagacaggatagaacgc
cgcagccctgccatttctccctcctcctctatgtctctctcttcctcctcagcacccaac
caccaccatcaccaccaccaccaccaccaacaacaacagcaacagcagcagcagcagcag
catcaacagctcagggcaatgccatctctccaccgagcacctgtgttccatccgcccaca
cagcacgcactagaacgcagagaggctgcggaacgagagagggagcgggagaaggaaaga
gagagagagagggagagagcagcttatggtggacgcctgtctccgccaacactcacaccc
atccagccagttagcttagcggcagctggtagcaaaacttcagcggagcagcagaagccc
cccacgctgctaccagaactcagggacgtcaaaggtcatggaaacgctgccgtcgtcacc
tctgtggcctcagccatcagtggagagatcatgacttcatctacagacacgtggagaggt
ggagaggtgattcaggaaagacgatgcccattctcaggagagaaaggagtgtcaaggggc
aagccccaatccgcaatggcatcagtcattgtgcgtccatcgacatctattaagtacgac
agccctcctggtgctaacaaatctggtgctatgctccttaaagagctcccccaggggagg
ttctacccatccaagcttcagggggaatgcctcagactaggggagagtgttagagaagct
gtagctggcagggttatccaacccaactcgaacctggacgacatgtgtgtccagtataaa
aatacttatatgcgtggcatgcagggaactatgggggccagtatcacaaactctgtgtgc
aggactgccatttcagccgcatcagcttttggcgtacagagtatcagtgggacagccatc
tctgagctgggctactctatctcagctcgaggagagatctcagcccataacgctggcttt
ggtggccgggtgctaagccactcaggaccaggagagtaccaggaggggttaggctcacgc
aacacatcaccaggggggtctctgcctccctctagtccagcagggacaccgcagcccagt
ccaagcctcaccccaacaccttcctccatttctggctccagtcagccttactcctcctcc
tttgtccaccttaagaagcacaaagcggccttggctgccgcccaatccagaagcaacttt
tccactgctccaacatccatcgcaactggaaactgcttcctacctgtggattcagttgac
aaaacccccattcacaactcgccccctccaccccccagccaagcctcgtcgtcttcagtc
gacatcagtggtggcatctcggcaagcgggagcacaacaacgggcaagtccagtcccctg
cccaacggccagagctctggaccagcctcaacaagcagcgggcagcccagtaactaccac
aagctgaagaaagcctggttaacccggcactcagaggaggacaggaacacaactgccact
gtatgctccaccaatactaaaccggagaaactgcccagcaccaccaccaccaccaccacc
agcacaagtaacacctcagccatggcagaaatgatcaaaccctgtacagtcaatctcagc
gcctccacctccagtgaggtggagatgagcaaagacagtgcaagcaaagtggagcgagag
aggcagctggaggagaaggtgggaggaggaggaggggaggagaggaaagcagctccctca
tcaaggcgagggaacaaacggtcatacgagtcgggttcagagagcgggggagatgactct
gatgccagtgagagcaagatggaaggcagagccaagcgtcagcctaaacccacctacaag
aagaagcagaatgatatggccaagaagaaaggagacaacgaaaaggatgaagatgacgtg
aagcccaatggcatcttcagatcggcccgagagaagactaaactcaaactagccagcagc
aatgggatcccccgctctgtcctgaaagactggaggaaggtgaagaagctgaagcagacc
gcggagtctttcctgcaggatgactcgtgtgctgaaattggacccaacctgcagaagtgt
cgggagtgcagggtggtccgcagcaagaagggagaggagccgacacattctcctgttttc
tgtcgcttctactatttcagacggctttccttcagtaaaaatggagtcatccggatggat
ggcttctccactccggaccagtttgatgatgaagcactggccctgtgggtccctgggctg
atggaggagagccacctggaccaaaccacagccaagtacatcctcagcttcataggagat
aagttctgtcagatggttgtgactgagaatactgcagccacctgggtcaagaaggatgcc
aagctggcgtggaagcgagcggtgaggggggtgagggagatgtgtgacgcctgcgaggca
acactcttcaacatccactgggtctgtcagaaatgtggcttcgttgtctgcttggactgc
tacaaggccaaggagagaaggagctccaaagataaagaactatacggctggcttaagtgt
gtgaaaggccaaccccacgatcacaaacacctgatgcccacacagatcatacctggcaca
gtgctgacagagttagtgacttccatgcactctctgagagagaaacacaacatcaaatcc
cactgcccctgcaccaacaagcagaacctcctcaccaaactaccagccaccaacggagtc
tcacaggttctgcagaacgtcctgaaccacagtaacaaactatccctggtgaaagctgag
ccgggctctcagcagaactctgaccagggaggaaccaaggctgagactaacggagggcgc
ggtggaggaagcagtccaggcagcgacgcaggaagtgctcctgtcaccccgcccgagtcc
cagtcccctctgcacttcctggctgacctggcagagcagaaatccagggaggagaagaaa
gaaaacaagtctgtgctgcttggtaaatcggtcaaggaggacaaggacggggacagcctg
gaggtcctgcagcagtgtaaaaccacctcactggtggcgaatagtacagagcagggctcc
acactcagagatctgctcaccaccacagcagggaagctgaagctgggctccactgatgca
ggaattgcctttgcaccagtctactcgactgcgtcacagactgggaaaggtgggaggacc
atgcccaatatccttgatgacatcattgcttcagtagttgagaataaaatccctgccagt
cggcagagcatcaccaccaaactgtcaatcaagcaggagcctgtcgccccaggcaacaac
aacaacaacaacatccctgtccctgctattactgaggatgccaaaccagacaggaagaag
tcagcgcatgttactgcagcagtgccagaagaatcaaccaatcagtatccagatattccc
cactgctggttaaacaacagacggttactgtggctcaaagatcacagcaaccagaacaac
tggaagctgttcagagagtgctggaaacaaggacagcctgtgttggtgtcagggatccat
aagcgactgaatggcggcctgtggaaagctgactccttcaaccaggagtttgcagaccat
cagggagacctcctgaattgtaaagaccaggttgtgtccaactctgggatcaaggagttc
tgggacggatttgaggacatcactaagcggcccaagtccaaggatggagaacctatggtc
tacagactaaaggactggccgtctggagaggagttcatggccctcatgccctcaagatat
gatgacttgatgaagaacctgcccctgccagagtactctgatccagaaggcaacctcaac
ctggcctcccacctgccatctttctttgtcaggccagatctggggccgagactctgctgt
gcctacggtgtagctgcatctcaggaccaggactttgggactgccaacctccatgtggaa
gtctcagatgtcgtctctgtgctggtctatgtaggagtagccaaaggcaatggagtcctg
tccaaaaccggagtgttgaagcgcctggaggaggaggatctagatgagggggttcgaaga
aggctcaaagactccagtgagacaccgggggctctgtggcacatctacctcaacaaagac
atggacaaagtccgagagttcctgcacaaggagcagggattagacgtgtcgctggaccag
gacccaatcagagagcagggcttgtacctgagcaggaagcagcgtcagcggctgctggat
gaacacgaagtccagggctggactgtagttcaattcctgggagactctgtactcatccca
gcaggggccatgcaccaggtccagaacctccacagctgtgtccaggtcatcaatgacttt
gtgtctccggagcacgtggccaactccttccacctgacccaggagctccggcccaacaaa
gaggaggtcaactacgaggataaactacaggtgaagaacattctgtaccactgtgtgaag
gaggtggtgagctccctgaagagggccagctctgaggaagacgatgaggaagagaactca
tga
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integrated database retrieval system
