KEGG   Streptomyces lividans: SLIV_31785Help
Entry
SLIV_31785        CDS       T03222                                 

Gene name
lig
Definition
(GenBank) putative DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
slv  Streptomyces lividans
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:slv00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    SLIV_31785 (lig)
   03410 Base excision repair
    SLIV_31785 (lig)
   03420 Nucleotide excision repair
    SLIV_31785 (lig)
   03430 Mismatch repair
    SLIV_31785 (lig)
Enzymes [BR:slv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SLIV_31785 (lig)
    6.5.1.6  DNA ligase (ATP or NAD+)
     SLIV_31785 (lig)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SLIV_31785 (lig)
DNA replication proteins [BR:slv03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SLIV_31785 (lig)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SLIV_31785 (lig)
DNA repair and recombination proteins [BR:slv03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SLIV_31785 (lig)
   NER (nucleotide excision repair)
    Other NER factors
     SLIV_31785 (lig)
   MMR (mismatch exicision repair)
    Other MMR factors
     SLIV_31785 (lig)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(7065253..7066791)
Genome map
AA seq 512 aa AA seqDB search
MLLARLAQVSREVAATSARSRKTVLLAELFREAEAADVPVVIPYLAGRLPQGRIGVGWKV
LSRRVPPADAPTLTVRDVDARLTRVGAVSGAGSQAERTRLVGELMGAATEDEQRFLIGLL
TGEVRQGALDAAAVEGLAAATDAPPADVRRAVMLAGSLQTVAEALLADGPSALDRFRLTV
GQPVLPMLAHSASSVAEAVGKLGAAAVEEKLDGIRVQVHRDGGTVRIYTRTLDDITDRLP
EVTEAALALPGERFILDGEAISLDADGRPRSFQETAGRVGSRTDVATAARAVPVSAVFFD
VLSVDGRDLLDLPLTERHAELARLVPEPLRVRRTLVHGPEDTGAAEEFLARTLARGHEGV
VVKGLDAAYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGKLSNLHLGARTADGSFA
MLGKTFKGMTDALLTWQTERLKELAVEEHGWGVTVRPELVVEIAYDGLQRSTRYPAGVTL
RFARVVRYREDKRPEDADTVDTLLAAHPGVAP
NT seq 1539 nt NT seq  +upstreamnt  +downstreamnt
atgctgcttgcccggttggcccaggtgtcccgggaggtcgcggccacgtcggcgcggtcc
cggaagaccgtcctgctcgcggagctgttccgtgaggcggaggcggcggacgtgccggtc
gtcatcccgtacctggcgggacggctcccgcagggccggatcggcgtcggctggaaggtg
ctgagccgccgcgtgccgcccgcggacgcaccgaccctgaccgtacgtgacgtggacgcc
cgtctcacccgggtcggcgcggtctccggcgccggttcgcaggccgagcggacccggctg
gtcggcgagctgatgggcgccgccacggaggacgagcagcgcttcctgatcgggctgctc
accggggaggtccgccagggcgccctggacgcggccgccgtcgagggcctggccgcggcg
acggacgctcccccggcggacgtgcggcgggcggtgatgctagcggggtcgctccagacc
gtggccgaagccctgctggccgacggacccagcgccctcgaccggttccggctcaccgtg
gggcagccggtgctgccgatgctggcgcacagcgcgtcctcggtcgccgaggcggtcggc
aaactgggcgccgccgcggtggaggagaagctggacggcatccgcgtccaggtgcaccgg
gacggcggcaccgtgcggatctacacccgcacgctggacgacatcaccgaccggctcccc
gaggtcaccgaggcggccctggcactgcccggcgagcggttcatcctggacggcgaggcg
atctccctcgacgcggacgggcgcccccgctccttccaggagaccgccggccgggtcggc
tcccgcaccgacgtggccacggccgcgcgggcggtcccggtctccgcggtcttcttcgac
gtactctccgtcgacggccgcgacctgctcgacctgccgctgaccgaacggcacgcggag
ctggcgcggctggtccccgagcccctgcgggtacggcgcactctggtgcacggccccgag
gacaccggtgcggcggaggagttcctcgcccggacgctggcgcgcgggcacgagggcgtc
gtcgtcaaggggctcgacgccgcctacagcgcgggacggcgcggcgcgtcctggctgaag
gtcaagccggtccacacgctcgacctggtggtgctggccgccgagtggggccacggccgc
cgcaccggcaagctctccaacctccacctgggcgcccgcaccgccgacggctccttcgcg
atgctcggcaagaccttcaagggcatgaccgacgctctgctgacctggcagaccgagcgc
ctgaaggagctggccgtggaggagcacggctggggcgtgaccgtacgccccgaactcgtc
gtcgagatcgcctacgacggcctccagcgctccacccgctacccggccggcgtcaccctc
cgcttcgcgcgcgtggtccgctaccgcgaggacaagcgccccgaggacgcggacaccgtg
gacaccctgctcgccgcccaccccggggtggccccgtga

DBGET integrated database retrieval system