Thermostichus lividus: BRW62_03955
Help
Entry
BRW62_03955 CDS
T05303
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
slw
Thermostichus lividus
Brite
KEGG Orthology (KO) [BR:
slw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slw03016
]
BRW62_03955
Enzymes [BR:
slw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BRW62_03955
Transfer RNA biogenesis [BR:
slw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BRW62_03955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ATS18041
UniProt:
A0A2D2Q0K2
LinkDB
All DBs
Position
complement(813093..815120)
Genome browser
AA seq
675 aa
AA seq
DB search
MEKGTLIEFRVQNQRRLATIDRPEGKKLWIAMDQHLQSHTLHPRHITFTVPHERFRPQDI
PAFWQQVQSLLDPESLEVAWEIIREEQRTITPQGLAELLFGETTAATCYAAYYLLSEDRF
YFKLKGEVYEPRSVAQVAELKHQHEKEAQRLAEEATFTEHLAQALAGEAVQWSAGDRKRL
EQLERYAIAIETSAQHQGAVELLRQLKRPTQPLGAFQLLVDLGLWSTHENLFLRRSQIQV
EFSAKVLDVAHNCLNSPPTDIDADLRRDLTHLKVYTIDDESTQEIDDGLSVEVVGDRQKL
WIHIADPSRWVMADDVLDHEARRRATTVYLPTGIIPMFPSELATGPMSLVEGRLCCALSF
GILLAESGEVLEYEICPSWIRPTYRLSYDDVDMILEQAVPAEADLLAIAHWGNRRSQWRQ
QRGAIRIDIPEPSIKVAGEEVEISPLRDSPARQLVAEMMILAGEVAADYGLREGIPLPFR
CQSPPELPPDDELRQLPAGVVRDCAIRRCMPRSEMSTQPNPHASLGLDAYCQVTSPIRRY
TDLLAHRQIKAHLRGETPPLTPEQLNELLLRLVSSIQESSLVERQTNRYWCLEYLRRHRD
EVWRGILLRWLRPEENLGLVLLEDLGVELAMRLQRQANLGESLLVRASRVDPRSDQIWLE
EVSEVPSSPAATVTP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaaggcaccctcattgagtttcgggtacagaatcagcggcggttagcgaccatc
gatcgccctgaaggtaaaaagctgtggattgctatggatcaacacctacaatcccatacc
ctacatcctcgccacattacctttaccgttccccatgaacggtttcgtccccaagatatt
cctgcattttggcagcaggtgcagtccctccttgatcctgagagccttgaagtcgcatgg
gaaattatccgcgaagagcagcgtaccattaccccgcaggggttagcggaactcttgttt
ggcgaaaccactgccgccacctgctacgcggcctattatttactgagtgaagaccgtttt
tatttcaaactcaaaggcgaggtgtatgagcctcgctctgtggctcaagtggcagagcta
aagcaccaacatgagaaggaagcccaacgcttggcagaggaggccaccttcacggaacat
ttagcccaggccttggcgggagaggcggtgcagtggtccgcaggagatcgcaagcgcctt
gaacaattagagcgttatgctatagccattgaaaccagtgcccagcatcaaggtgcggtg
gagttactccgtcaactgaagcgacccactcaaccccttggtgcctttcaactactggtg
gatttggggctgtggtcaacgcacgaaaatctttttctgcgccgtagccagattcaagtt
gaattttctgccaaggtacttgatgtggctcataactgcctaaactcaccaccaacggat
atagatgctgacctacgccgggatctgacgcatctgaaggtctataccattgacgatgaa
agtacccaagaaattgacgatggtttgagtgttgaagtcgtgggcgatcgccaaaagctg
tggattcatattgcggatccaagccgctgggtgatggccgatgatgtgctagaccatgaa
gcccgccgccgcgccacgaccgtgtatttacccacgggcatcattcccatgtttccctcg
gagttggccacaggcccgatgagcttggtggaagggcgtctctgctgtgctttgagtttt
ggcatcctcttggccgagagcggcgaagtcctcgaatacgaaatttgcccaagctggatt
cgccccacctaccgcctaagctacgatgatgtggatatgatcttagagcaggcggtgccc
gccgaagccgatctgctggcgatcgcccactggggcaaccgccgtagccaatggcggcaa
cagcgcggcgccatccgtattgatattcctgagccgagtattaaggtcgccggtgaggag
gtggagatctccccgctgcgggactcgccagcgcgacaactggttgcggaaatgatgatt
ttagctggcgaagtagcagcggattacggtttgcgcgaagggattcccttgccctttcgc
tgtcaatctccaccagagttgccccccgacgacgaattacgccaacttcccgctggcgtc
gtgcgcgactgtgccattcgtcgctgtatgcctcgcagtgaaatgagcacccagcctaac
ccccacgccagtttaggcctagatgcctactgccaagtaacctccccaatccgtcgctat
accgatttgctggcgcaccgccaaattaaagcccatctgcgcggcgaaacaccccccctt
accccagagcaactgaacgaactactgctgcgactcgtttcctccattcaagagtcatcc
ttagtggagcgacaaaccaatcgctactggtgccttgagtacctgcgccgccaccgcgat
gaagtgtggcggggaatcttactgcgctggttgcgaccagaggagaacttgggtttagtg
ctcttagaagacttgggggtagagttggccatgcgtttgcagcgccaagcaaacttgggt
gaatcgctgctagtgcgcgccagtcgggttgatccccgcagtgatcaaatttggctggag
gaagtctcagaggttccgtcttcgccggcggcgacggttacgccataa
DBGET
integrated database retrieval system
