Solanum lycopersicum (tomato): 101250831
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Entry
101250831 CDS
T02665
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 41 isoform X1
KO
K19466
ATP-dependent RNA helicase DDX59 [EC:
5.6.2.7
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101250831
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101250831
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GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-HIT
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-GeneID:
101250831
NCBI-ProteinID:
XP_004228633
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Position
1:914934..918930
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AA seq
527 aa
AA seq
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MESSVAAENDSNPPEDDVKERCWDQREALPGEPRCIVCGRYGEYICDETDDDICSLECKG
ILLSRLGESRQPTARPCPVKLPATDECYYVRDNGKSEVNPLTTEQTELLRRKLDILVKGD
TTPPPILSFASCKLPQKLLENIEVAGYEMPTPVQMQAIPAALARQSLLVSAETGSGKTGS
FLIPIVSQCAKFNEEHFPNQQQPLAMVLTPTRELCIQVEDQAKVLGKGLPFKTALVVGGD
AMAGQLHRIQQGVSLIVGTPGRLIDLLTKHEIELDTISILVLDEVDCMLQRGFREQVMQI
FTALSQPQVLMYSATIPKDVEKMASSMAKKVTVISVGKPNKPNQSVKQLAIWVDSKRKKQ
KLFDILMSKQHYKPPVIVFVDSRLGADLLSEAITVSTGLKALSIHGEKSMKDRREIVRSF
LVGEIPVIVATGVLSRGIDLLTVKQVIVFDMPNSIKEYVHQVGRASRMGEEGTSIVFVNE
ENKKLFPQLVEALKTSGAAIPRELANSRYSVGSFSAGRGQKKRKLGF
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttctgtagctgcagaaaatgatagtaatcccccagaggatgatgtgaaggag
aggtgttgggaccaaagagaagcgctgccgggtgagcctcgatgtatcgtatgtggccgc
tatggtgagtacatttgtgatgagactgatgatgatatttgcagcttggaatgcaagggt
atattgttgtcgcggcttggagaatcacggcaacctactgctcgtccatgccctgtgaag
ttaccagcaactgatgagtgctattatgtaagggataatggtaagtctgaagtgaatccg
ctaacaactgagcagactgaacttctgagaaggaaacttgatattcttgtgaagggagat
actacaccgcctcccatcttgtcatttgcttcttgcaagctacctcagaagcttctcgag
aatattgaagttgctggttatgaaatgccaactcctgttcaaatgcaagcaatccctgct
gctttagcacggcaaagcttgcttgtttcagcggagactggttctggtaaaactggctct
tttctaattcctatagtttctcagtgcgcgaaattcaatgaagagcatttcccaaaccag
caacaaccattagctatggttctcacacctacgagagaactctgcatacaagtagaggat
caagctaaggtgctcgggaagggtttgccattcaaaactgcattggtggtaggtggtgat
gccatggcaggacagctccaccgcatccagcagggagtatctttaattgtgggaactcct
ggaaggctcattgaccttttaacgaaacacgagattgaactggatactatttcaattctt
gttcttgatgaagttgattgcatgctccaaagaggtttccgtgagcaggtgatgcagatt
tttacagctctgtctcaacctcaagtgttaatgtattccgctacaattcctaaagacgta
gagaagatggcaagctcaatggcgaaaaaggttactgtcatctctgttgggaagccaaat
aaacctaatcagtctgtcaagcagttagctatttgggtagactcgaaaaggaagaagcaa
aagctttttgatattttgatgagcaagcagcattacaagccaccagttattgtatttgtg
gattctagactcggagcagatctcctttctgaagcaataacagtaagcactgggctaaaa
gcattatcaattcacggtgagaaatccatgaaggataggagagaaattgtaagatcattt
ctagttggagaaattccagttattgtggccacaggagtgttgagtcgaggaatcgatctg
ttgactgtaaaacaggttatagtgtttgatatgccgaattccatcaaggagtacgtgcac
caggtgggaagggcatctagaatgggggaggaaggtacatcaattgtctttgtgaatgaa
gagaacaagaaactgtttccccagttggttgaagctcttaaaacatccggtgctgcgatt
ccccgagagcttgctaattcacggtattctgttggctctttctctgctggtagaggtcag
aaaaaacgaaaacttggtttctga
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