Solanum lycopersicum (tomato): 101257458
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Entry
101257458 CDS
T02665
Name
(RefSeq) lysine-specific demethylase REF6
Organism
sly
Solanum lycopersicum (tomato)
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Gene cluster
GFIT
Motif
Pfam:
JmjC
JmjN
zf-H2C2_2
zf-C2H2
2CSK_N
Motif
Other DBs
NCBI-GeneID:
101257458
NCBI-ProteinID:
XP_004236313
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Position
3:complement(63707555..63715722)
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AA seq
1252 aa
AA seq
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MAEASGNIEVFSWLKTLPVAPEYHPTLEEFQDPIAYIFKIEKEASKYGICKIVPPVPAPP
KKTALANLNRSLSARAGSNGPTFTTRQQQIGFCPRKHRPVKKPVWQSGETYTVQQFQVKA
KAFEKNYLRKNSKRALTPLEVETLYWKATVDKPFSVEYANDMPGSAFAPKKASLAAGGIG
EVSTLADTEWNMRGVSRSKGSLLKFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLN
YLHMGSGKTWYGVPRDAAVAFEEVIRVQGYAGETNPLVTFATLGEKTTVMSPEVLLSAGI
PCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEASNIATPEWLRVAKDAAIRRASINCPPM
VSHFQLLYDLALSLCSRVPKNIRIEPRSSRLKDKKKSEGDMLVKELFVEDLNANNYLLHI
LGEGSPVVLLPQNSPGISICSNLVAGSQSKVNSRLFPSSSNSDHEVKSKKDSAYDDRKLG
RKQGMKQYAGISLEKGKYSSWHTGNSLPDSGRKDDAQSSPETEKVNLDAARGMTYKCDTL
SEQGLFSCATCGILCYTCVAIIRPTEAAARHLMSSDYSDFNGWTGSVSGITATGRDPNAA
ESDSSSGRFVKRAPALIDDPVESSDRIQKLNNGSVEELSRTNTRKETSSLGLLALAYANS
SDSDEDEIEVDIPVEACESRHTESEDEVFLRVIDPYGNHRQKRAVSQGRNCQKFDNSVQL
ENESYPSGESNTLFGRSSHQPRSHQVPAKCISNIREIAQNNAVAPFDNARMQFTSTSDED
SFRIHVFCLQHAVQVEEQLRRIGGAHISLLCHPDYPKLEAQAKQVAEELGSDHFWREISF
REASKEDEEMIQSALEIEEAIHGNGDWTVKLDINLFYSANLSRSPLYSKQMPYNFIIYNA
FGRDSPDNTPEKSEYTGRGLGKQRRAIVAGKWCGKVWMSSQVHPLLAERTIDEEQEQNKS
ISALIKIEVKSERPRERTPTSKTVATTCKTGKKRSSTAASRNASNAQLIIADDHDDSLLS
SILQQHRRKTNLRSKRIKYETPEPQKDVDKKKIFGSLIDDDPDGGPSTRLRKRIPKPSNE
SPAKSVKAKPAPTKQHESKKGPKVKLPFANSIAKKEPVTKGPRSNIGKRMREEGEYHCDL
EGCSMSFSSKQELTLHKKNVCPVEGCKKKFFSHKYLVQHRRVHMDDRPLKCPWKGCKMTF
KWAWARTEHIRVHTGARPYACSEIGCGQTFRFVSDFSRHKRKTGHISKKGRS
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcaagtggtaacattgaggtattttcatggttgaaaaccctaccagtggca
ccagagtatcatccaaccctagaagaatttcaagatcccattgcttacattttcaagatc
gaaaaggaagcttctaagtatggaatttgcaaaattgtacctccagtacctgcaccaccg
aagaaaactgctcttgctaacctaaaccggtcactgtcagctcgggccggttctaatggc
ccaacatttactactaggcagcagcagatcgggttttgtccgaggaagcacagacccgtt
aagaaacccgtttggcaaagcggagaaacctatacggttcagcaatttcaggttaaagct
aaagcctttgagaagaattacttgagaaagaattcaaagagagcattgacaccacttgaa
gttgaaaccctttattggaaagccactgtggataaacccttttcggtggagtatgcaaat
gatatgccaggttctgcatttgcgccaaagaaggcttctttggcagcagggggtattggg
gaagtgagtactctggcagatacagagtggaatatgagaggagtgtcaaggtcaaaaggg
tctttactgaagttcatgaaagaggagatcccaggggtaacttcccctatggtgtatctt
gccatgatgtttagttggtttgcttggcatgttgaggatcatgacttgcatagcttgaat
tacctgcatatgggttctgggaagacttggtatggtgtgcccagggatgcagcggtggca
tttgaagaggtgatcagggtccaaggttatgcaggagaaactaatcctcttgttaccttt
gctacacttggggagaagaccacagtcatgtcacctgaagtactgcttagtgctggtatt
ccatgctgcaggctggtgcaaaatgccggagagtttgttgttacctttccacgagcctat
cactcagggtttagtcatggatttaattgcggggaggcttctaatattgctactcctgag
tggttgagagtcgcaaaagatgctgcaatccgtagagcatcaattaattgtcctccaatg
gtgtcacatttccagttgctttatgatcttgcactttcactgtgttcaagagtaccaaag
aacattagaatagaaccaaggagttctcgcctgaaggacaagaaaaagagtgaaggagat
atgttggtcaaagaactatttgttgaagatttaaacgctaacaattatcttcttcacatt
cttggagaaggatcacctgttgtacttctccctcaaaactctccagggatttctatttgc
tctaatttagtagctggatcccagtcaaaggtaaattccaggttgttccccagttcatcc
aattcagatcacgaggtgaagagtaaaaaagattccgcatatgatgatcgcaaactaggc
aggaaacaggggatgaaacaatatgcaggcatctctttagagaagggaaagtactcttct
tggcacactggtaacagtctgccagactctggcagaaaggatgatgcccaatcctctcca
gaaaccgaaaaagtcaacctggacgccgcaagaggaatgacttacaaatgcgatacactg
tcggagcaaggacttttttcttgtgcaacttgtgggatcctatgttatacgtgtgtggcc
ataattcgaccaacagaagcagctgctcgtcatttgatgtcatctgattatagtgatttc
aatggctggacaggaagtgtaagtggcataactgctactggtagggacccaaatgctgca
gaatcagattccagttctggacggtttgttaaaagggctcctgccttgattgatgaccca
gtagagtcatctgatcgaattcagaaattgaataatggaagtgtagaagagctttcaagg
accaacacacgtaaagaaacttcttcccttggcctgttggctttagcttatgccaattcg
tcagattctgatgaagatgagattgaagtagatattcctgttgaagcttgtgaaagcaga
catacagagtctgaggatgaggtttttctccgagttattgatccttacggaaaccacaga
caaaaaagagctgtatctcaaggtagaaactgtcaaaaatttgacaattccgttcagttg
gagaatgaaagttacccatcaggggaatcaaatactttatttggtaggtcaagccatcaa
ccaaggtcccatcaagtccctgcaaagtgtatttccaatataagggaaatagcacaaaac
aatgctgttgctccatttgataatgcacgtatgcaatttacttcaacatctgatgaagac
tctttcagaatacatgtattctgtctccagcatgctgtacaagtagaagaacagctccgt
cgaattggtggagcacatatttctcttctttgtcatccagactatcccaagctagaagct
caagctaaacaagtggctgaagagttggggagtgatcatttctggagagagatttcattc
cgcgaggccagtaaagaagatgaggaaatgatacaatcagctttggaaattgaagaagct
atacatggcaatggggactggactgtgaaattagacatcaacctcttctacagtgccaat
ctaagccgttctcctctctatagtaaacagatgccttataacttcattatatacaatgca
tttggtcgtgattctccagataataccccagaaaaatcagagtatactgggagagggtta
gggaagcagaggagagcaattgttgctggaaaatggtgtggtaaagtctggatgtctagt
caggttcatcctctgcttgctgagaggactattgatgaagaacaagaacagaacaaaagc
atctcagccctgattaagattgaggtgaagtctgagagaccacgtgaaaggactccgact
agtaaaactgtcgctacaacttgcaagactggaaaaaagaggagtagtacagcagcaagt
aggaatgcttcgaatgctcaattaataatagcagatgaccatgatgattctttacttagt
agtattcttcagcagcaccggaggaaaactaatcttaggagtaagagaattaaatatgag
actcctgaacctcaaaaggatgttgataagaagaagatatttggctcactcattgatgat
gatccagatggtgggcctagcacccgtctgaggaaaagaattccaaaaccgagcaacgag
tcgcccgccaagtcggtgaaggccaaaccagctccaactaagcagcacgaaagcaagaaa
ggtcccaaggtcaaacttccttttgcaaatagcattgcaaagaaagaaccagtaacgaag
ggtcctagaagtaatataggtaaaaggatgagggaggaaggagaatatcattgtgacttg
gaagggtgcagtatgagttttagctcaaagcaggagcttacattgcataaaaagaatgtt
tgtcctgtcgaagggtgcaagaagaagttcttctcacacaagtatttggtacagcatcga
agggttcatatggacgaccgtcctctgaaatgcccttggaagggctgcaagatgactttt
aagtgggcatgggctcgaactgaacacataagagttcatacaggtgcacgtccttatgct
tgttctgagatcgggtgtggccagacatttcgttttgtgtcagatttcagtcgtcacaag
aggaagacaggtcatatttcgaagaaggggagaagttga
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