Solanum lycopersicum (tomato): 101259548
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Entry
101259548 CDS
T02665
Name
(RefSeq) leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 precursor
Organism
sly
Solanum lycopersicum (tomato)
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_4
LRR_1
LRR_8
ABC1
Pkinase_fungal
APH
Motif
Other DBs
NCBI-GeneID:
101259548
NCBI-ProteinID:
NP_001302425
UniProt:
K4C8Q3
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Position
6:44375481..44377358
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AA seq
625 aa
AA seq
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MTSNIHFFLLYVVSLFLFVQARLNLYPPDHAALLLVQKDLGIISVNNPCTLAGISCERRP
GNTTQVVRVTRIVFRSNGLKGTLSSAIGKLTELKELSLSDNQLSEQIPVQIIDCRKLEIL
QLQRNRFSGKIPSELSALNRLRIVDFSSNEFSGNLDFLKYFPNLEKLSLADNMFTGKIPF
SLKSFRNLRFLNISGNSFLEGPVPVMSQIEHLSADLNRKNGVPKRYILAENSTRISAMGP
ASVPAPAPAPVNRVVPAMHKRKNKKRKLRSWFLGFLAGTFAGGISAVLCSLLFKMVMFFV
RRGNNDSSLTIYSPLIKKAEDLAFLEKEDGVASLEMIGKGGCGEVYRAELPGSNGKIIAI
KKIIQSPMDAAEITEEDTKALNKKMRQVKSEIQIVGQIRHRNLLPLLAHMPRPDCHYLVY
EYMKNGSLQDILQQVTEGTRELDWLGRHRIAAGVAAGLEYLHINHTQRIIHRDLKPANIL
LDDDMEARVADFGLAKAVPDAHTHITTSNVAGTVGFIAPEYYQTLKFTDKCDIYSFGVVL
AVLVIGKGPSDDFFQHTSEMSLVKWLRNVMTSDDPKIAIDPKLIGNGYDEQMLLVLKIAC
FCTLDNPKERPNSKDVRCMLTQIKH
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgaatatccacttttttcttttatacgttgtgagccttttcctttttgttcaa
gcaagattgaatctttatccaccagatcatgctgcactcttgcttgtacaaaaggactta
ggcatcatttctgttaacaacccgtgtacgctcgcaggaatatcgtgcgagcgtagaccg
ggtaacacaacacaagttgtgagagttacccgtattgtattcagatccaacggattaaag
ggaactttgtcttctgctattggcaaactcactgagctcaaagagctttctctttccgac
aatcaactatctgaacaaatccccgttcagattattgattgtcggaagttagagattctt
caacttcaaaggaacagattttctgggaagattccatccgaattgtcagctttaaaccgt
ttaaggatagttgacttttcatcgaatgagttttcggggaatcttgatttcttgaagtac
tttcctaatctggaaaaactgtctctggctgataatatgttcactggaaaaataccattt
tcattgaaatctttccgaaatcttcgttttctcaacatttcagggaatagtttccttgaa
ggtccagtacctgtcatgagccaaattgagcatttatcagcagatttgaatcgaaaaaat
ggcgttcctaaacgttacattctagctgagaattcaacaaggatatctgcaatgggacct
gcttcggttccagctccagctccagcacctgtcaatcgtgttgtaccggcgatgcataaa
cgtaagaacaagaaaaggaagttacgatcttggtttcttggtttcctagctggaactttt
gctgggggtatatctgctgtgctctgttccttgctattcaagatggtaatgttcttcgta
agaagagggaataacgattcaagtttaacgatatacagtccactgatcaagaaagccgag
gacttggctttcttagagaaggaagatggagtggcatcgcttgaaatgattggaaaaggt
ggctgtggagaagtttatagagcagagctaccggggagtaatgggaagattatagctata
aagaagattatccaatccccaatggatgctgcagagatcacggaggaagatactaaggcg
ttgaacaagaaaatgcgtcaagttaaatcagaaattcaaattgtaggtcaaatcagacac
cggaatctgcttccattactcgcgcatatgccaaggccagactgtcattacttggtctac
gaatacatgaaaaatgggagtttacaggatatcctgcagcaagtcacagaaggcacaagg
gaattagattggttgggacgacacagaattgcagcgggggtagctgctggtctcgagtat
ctccatataaaccatactcaacgcataattcacagagatttaaagccagcaaatatccta
cttgatgatgacatggaagctcgagttgctgattttggccttgcaaaggcagttccagat
gctcatacacatatcaccacttcaaatgttgcaggaactgttggatttattgcaccagaa
tattatcagacactgaagtttacagataagtgtgatatatacagctttggtgtggtgcta
gctgtgttggttatcggtaagggtccatcggatgattttttccaacatacttctgagatg
agtttagttaagtggctgaggaatgtaatgacttctgacgatcctaaaatagcaattgat
cctaagcttataggaaatggatacgacgaacaaatgcttttggttctcaagatagcttgc
ttttgtactctcgacaatccaaaggagaggcctaacagtaaggatgttaggtgcatgtta
actcagatcaagcattag
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