Solanum lycopersicum (tomato): 101263922
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Entry
101263922 CDS
T02665
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101263922
Spliceosome [BR:
sly03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101263922
Complex C
U4/U6.U5 tri-SnRNP related factors
101263922
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Motif
Other DBs
NCBI-GeneID:
101263922
NCBI-ProteinID:
XP_004244401
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All DBs
Position
8:124836..130680
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AA seq
920 aa
AA seq
DB search
MEKDLSDNRHCRRRNDEDVKKVERQRYRDRSSSDDDGGRGDRRARRRTIEHERGDDDDDG
GGGGNNGRDDRRLSRRRTERGTRDDSDDDLKRKSQIDEREDSAEKGYRRLKEEQEEEEED
EGDRDKTRERRRKSEQVDADEKDDRRERRLRNDREDDAGRDDRRQRRPKDGSEEDDERRD
GRKESAKNVSQVDEDVERDDRSKRKRRHESEADDVKDDRKERSRRNGDERNDRKERSRNN
GDDWREKKQRESDDEKVQKRREGRVDRYNDGREGDRKEKSRNIEREKKDDGDANDTKDTR
QRIGADKHGKDNNREDNTQEDGALKASEVSKVQKQDVNLNVDTTKLGRSGGVYIPPFKLA
RMMKDVQDKSSVEYQRMTWDALRKSINGLVNKVNAANLKNIIPELFAENLIRGRGLFCRS
CMKSQIASPGFTGVFAALVAVVNTKFPEVGDLLLRRIILQLQRAYKRNDKPQLLAAVKFI
AHLVNQQIVHELIALELLTVLLEKPTDDSVEVAVGFVTECGSMLQDLCPRGLHGIFERFR
GILHEGEIDRRVQFLIESLFALRKAKFQGYQAVRPELDLVEQEDQLTHEVSLSDTIDPEI
TLDIFKPNPNFLENERKYEELKKAILGDESEEGDSDAESEDEDDNKDEESEEEDEEQMQI
KDETETNLINLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYL
RYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHA
LAYIRLTEEDTTSSSRIFIKILFQEMSEHLGIRLLNERLNDPTMQDSLDSIFPKDNPKNT
RFAINFFTSIGLGGITENLRDYLKNMPRLIMQQQKPISESDDESGSSGSESSGSESSSTS
SDDSDSESDDSPRKRRRRRR
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatttgagtgacaatagacattgtaggagaaggaacgatgaggatgtgaag
aaagttgagcggcaacgatatagggatagaagcagctcggatgatgatggcggaagaggt
gataggagggcgaggaggcgaacaattgaacatgaacgtggtgatgatgatgatgatggt
ggtggtggtggtaataatggaagggatgataggaggttgtcgaggcgaagaactgaacgt
ggaactagggatgatagcgatgatgatttgaagcggaagagtcaaatagatgaacgtgaa
gatagtgctgaaaagggttataggaggctaaaagaagagcaagaagaagaagaagaagat
gaaggtgacagagataaaacgagggagaggaggagaaaaagtgaacaggtagatgctgat
gagaaggatgataggagggagagaagactaagaaatgaccgtgaagatgatgctggaagg
gatgacagaagacagaggagaccaaaggatggaagtgaagaagatgatgaaaggagggat
ggtaggaaggaaagcgcaaaaaatgtaagccaagttgatgaggacgttgaaagagatgat
agaagtaagaggaaacgtagacatgaaagtgaagctgatgatgtaaaggacgatagaaag
gagaggagtcgaaggaatggagatgaaagaaacgataggaaggagaggagtcgaaacaat
ggagatgattggagggagaaaaagcaacgggagtctgatgatgaaaaggtgcaaaagaga
agggagggtagggttgatcggtataatgacggtagagaaggggataggaaagagaagagt
aggaatatagaaagagaaaagaaggatgatggtgatgccaatgatacaaaggatacaagg
caaaggattggggctgataaacatggaaaagacaataatagggaagataatacccaagaa
gatggggctctgaaagccagtgaggtttccaaggtgcaaaagcaagatgttaatttgaat
gtcgatacaacaaaattgggcaggagtgggggagtgtacattccaccattcaaattggct
aggatgatgaaggacgttcaggacaagagcagtgttgagtaccagaggatgacttgggat
gctctgagaaagagtatcaatggactggtgaataaagttaatgcagcaaacctcaaaaac
attattccagaattattcgcagagaatttaattcgagggaggggtttgttttgtagatcc
tgtatgaagtcccaaatagcttctccgggttttactggtgtgtttgctgctttggttgca
gtcgttaataccaagttccctgaagtgggtgatcttttgttaagaaggatcatactgcag
ctgcaaagagcttataaacgtaatgataagcctcagctgttagcagctgtcaaatttatt
gctcaccttgtgaaccaacaaatcgtccacgagcttattgctcttgaactactcacggtt
ttgttggagaaacctactgatgatagtgttgaggttgcagttggttttgttacagaatgt
ggttcaatgcttcaggacctctgtccacgaggattacatggaatctttgagcggttccgt
ggtatacttcatgaaggagaaatagatagacgtgttcagttcttaattgaaagcctattt
gcattgcgtaaagcaaaatttcagggttaccaagctgtgcgtccagaacttgaccttgtt
gagcaggaagatcaattaacacatgaagtctctctttcagatacaatagatccagaaatt
actttagatattttcaagccgaatcctaatttcctagagaacgaaagaaagtatgaagaa
ttaaagaaggcaatacttggtgatgaatctgaagaaggagactctgatgccgaatcagag
gatgaagatgacaataaagatgaagagtctgaagaagaagatgaggagcaaatgcaaata
aaggacgaaacagagacaaacttaatcaaccttcggagaacgatttaccttactattatg
tctagcgttgactttgaagaagcagggcataagctgttgaaaatcaaactagagcctggt
caggagatggaattgtgcataatgttattggagtgctgcagtcaggagaggacttatctt
cgttactatggactactgggacagcgattttgcatgattaacaaaatccatcaagaaaac
tttgagaaatgctttgtgcagcagtactccatgatccaccggctcgaaactaataaactt
cgtaatgtcgccaagttttttgctcatttgctcggcactgatgctcttccttggcatgct
ttggcttatatacggctgactgaggaggacacaacctcctcttctcgtatatttattaaa
atcctattccaggaaatgtcggagcaccttggtatccgcttgttgaatgagcgtctaaac
gacccaaccatgcaagattctctcgactctattttcccaaaggacaatcccaagaataca
aggtttgctatcaactttttcacttccattggtcttggtggaattactgaaaatctacga
gactatctaaagaacatgccaaggcttataatgcaacaacaaaagcccatttctgaatcg
gatgatgagtctgggagttctggttcagaatcttcaggatctgaatcatcatcaaccagt
tctgacgacagtgatagtgaaagtgatgatagtccaaggaagcggaggaggaggagaaga
tag
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