Solanum lycopersicum (tomato): 109120858
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Entry
109120858 CDS
T02665
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sly01002
]
109120858
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
109120858
Enzymes [BR:
sly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109120858
Peptidases and inhibitors [BR:
sly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109120858
Ubiquitin system [BR:
sly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109120858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
109120858
NCBI-ProteinID:
XP_019070651
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All DBs
Position
8:57015..59961
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AA seq
451 aa
AA seq
DB search
MKKVNLENVQTSPDHDALKSQEIEKNNIDLSLVKIEVEEKNSDLNEYRSPVRVDSDSMGC
IVSSDGNELLYSGWAEWSPSIVAPITSIKPENFKETVEETRSIENKPSKMVGIGLSNLGN
TCFLNAVLQCIMHTVVLLQLLASIDHISPYHTIGFCVLCMIRNLVDLSIVGAYDYVSPRK
IVSHLREPQDNIVEESFGGRFVSKLRCCNCEYFSVTQEPFIDISLDIEDIDSVPEALNSF
TKIEKFEFSCEMCEIHGSFEKQLLVDRAPSVAALHLKRFKNNGTDIQKVEKHVSFPLELD
MLLYTNEINNEEMKYDLYAIIVHSGPSISSGHYYSFIRCAPNEWYKFNDKQVDFVEEDFV
LAQEAYIIFYAKRDTLWFSDYTQIYRSFINLVIPSTSNDHLLDVDDQVYCEDQLQDVEIK
KVCSKDEEESMDVNEKKRKLEDSPSKDVKAD
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtaaatttagagaatgtacaaacatcacctgatcatgatgctttgaaatcc
caagaaattgagaaaaacaacatagatttatcattagtaaaaatcgaagttgaagaaaag
aattcagatttgaatgaatatcgatcacctgttcgagttgattctgattcaatgggctgt
atcgtttcttcggatggtaatgagcttttatattcgggttgggctgaatggtctccttca
atagttgcaccaattacttcaattaagcccgaaaatttcaaagagacggttgaagaaact
aggtctattgagaataagccttctaaaatggtgggaattggcctgtctaacttaggcaac
acatgttttctgaatgcggttttgcaatgtattatgcacaccgtagtgttgcttcagcta
cttgcttcgattgatcatatatcgccatatcacacaattggattttgtgtactttgcatg
attcgaaatctagttgacctttctatagttggtgcttatgattatgtctcaccgagaaaa
attgttagccacttgagagaaccacaagacaacattgtagaggagtcctttggtggtcgt
tttgtaagcaagctccgttgttgcaattgtgaatatttctctgtcacacaagagcctttc
atcgacataagcttagatattgaggatattgacagtgtaccagaagcattgaactctttc
accaaaatcgagaaatttgaattttcttgtgagatgtgcgagatacatgggtcatttgag
aaacagctcctcgttgatcgtgccccttctgttgctgccttgcatttgaaaagattcaaa
aataacggaacagatattcagaaggtggagaagcatgtttcatttccgctggaattggac
atgcttctttacaccaacgaaatcaataatgaagaaatgaaatacgatctctacgcaatt
atagtgcattccggaccttcaatatcttcaggacactattatagcttcattcgttgtgct
ccaaatgaatggtacaaatttaacgacaagcaggttgattttgttgaagaagattttgtc
ttagcacaggaagcatatattatattctatgcaaaaagggacactttatggttttcagac
tatactcaaatctataggtccttcataaatttggttatcccctcaacatcaaatgatcat
cttttagatgttgatgatcaggtttattgcgaagatcaattgcaagacgtggaaataaag
aaggtgtgttcaaaagatgaagaagaatccatggatgtgaatgaaaagaagaggaagctg
gaagattctccaagtaaagacgtaaaggcggattaa
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