KEGG   Streptomyces avermitilis: SAVERM_2548
Entry
SAVERM_2548       CDS       T00126                                 
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sma  Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:sma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sma03016]
    SAVERM_2548 (truB)
Enzymes [BR:sma01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     SAVERM_2548 (truB)
Transfer RNA biogenesis [BR:sma03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SAVERM_2548 (truB)
 Prokaryotic type
    SAVERM_2548 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: BAC70259
NITE: SAV2548
UniProt: Q82K56
LinkDB
Position
complement(3127064..3127969)
AA seq 301 aa
MTEKHRTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVEKAT
KLLGHLALTEKEYLGTIRLGQNTLTDDAEGEIISSTDASRVTRDAIDAGVAKLSGAIMQV
PSKVSAIKIDGVRSYKRAREGEDFEIPARPVTVSSFAVYDVRDAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLDAARTLDQLQEELTVMPIAEAAA
AAFPRWDVDTKRARLLLNGVRLEMPEEYAGRGAVAVVDPAGRFLALVEEQKGKAKSLAVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaccgagaagcacaggacgcccgacgggcttgtcatcgtggacaagccgtcgggcttc
acttcgcacgacgtggtcgccaagatgcgcgggatcgccaggacccgccgcgtcggacac
gccggcaccctcgaccccatggcgacgggcgtgctcgtcctcggcgtcgagaaggcgacc
aaactcctcggccatctcgcgctcaccgagaaggaatacctgggcacgatccgtctcggg
cagaacaccctgacggacgacgccgagggcgagatcatctcctcgacggacgcctcccgg
gtgacccgggacgcgatcgacgcgggggtcgccaagctcagcggcgccatcatgcaggtg
ccgtccaaggtcagcgcgatcaagatcgacggcgtgcggtcctacaagcgggcgcgcgag
ggcgaggacttcgagatcccggcccgcccggtgaccgtctcgtcgttcgcggtgtacgac
gtgcgtgacgcggtcgccgaggacggcacaccggtgctcgacctggtggtgtcggtggtg
tgctcgtccggcacgtacatccgggcgctggcccgggacctgggcgcggacctgggcgtc
ggcggacatctgacggcgctgcgccggacgcgcgtcggaccgtacaagctcgatgccgcg
cgcaccctcgaccagctccaggaggagctgaccgtgatgcccatcgccgaagcggccgcc
gccgcgttcccccgctgggacgtggacacgaagcgggccaggctgctgctcaacggcgta
cgcctggagatgcccgaggagtacgcgggccgcggcgcggtggcggtcgtcgaccccgcg
ggccgcttcctggccctggtggaggagcagaagggcaaggcgaagagcctggccgtgttc
ggctga

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