Streptomyces avermitilis: SAVERM_5272
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Entry
SAVERM_5272 CDS
T00126
Symbol
sidD
Name
(GenBank) lysine decarboxylase
KO
K13745
L-2,4-diaminobutyrate decarboxylase [EC:
4.1.1.86
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00260
Glycine, serine and threonine metabolism
sma01100
Metabolic pathways
sma01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAVERM_5272 (sidD)
Enzymes [BR:
sma01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.86 diaminobutyrate decarboxylase
SAVERM_5272 (sidD)
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
SepSecS
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BAC72984
NITE:
SAV5272
UniProt:
Q79Z44
LinkDB
All DBs
Position
complement(6386774..6388216)
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AA seq
480 aa
AA seq
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MRSHLLNDTTADRYRRSVTEGIERVAAKLATTASPFTGITVDALAPRIERIDLDRPLHDT
TAVLDELEEVYLRDAVYFHHPRYLAHLNCPVVIPAVVGEAILSAVNSSLDTWDQSAGGTL
IERKLIDWTNERIGLGPAADGVFTSGGSQSNLQALLLAREEAKSDDLARLRVFASEVSHF
SVKKSAKLLGLSADSVVSIPVDHDKRMQTVALAHELDRCKRDGLLPMAVVATAGTTDFGS
IDPLPEIAELCAQFGAWMHVDAAYGCGLLTSLKHRDRIDGIERADSVTVDYHKSFFQPVS
SSAVLVRDASTLRHATYHAEYLNPRRMVEERIPNQVDKSLQTTRRFDALKLWMTLRVMGA
DGIGQLFDEVCDLAAEGWKLLAADPRFDVVVEPSLSTLVFRYIPAAVTDPAEIDRANLYA
RKAIFASGDAVVAGTKVGGRHYLKFTLLNPETTADDITAVLDLIAGHAEQYLGESLDRAS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgcacctgctcaatgacacgaccgcggatcggtaccgccgttccgtgaccgaa
ggaatagagcgggtggcggccaaactcgccaccacagcaagcccgttcaccggcatcacg
gtcgacgccctcgccccccggatcgagcggatcgacctcgaccgcccgctgcacgacacc
accgcggtcctcgacgagctggaagaggtctacctccgcgacgccgtctacttccaccac
ccgcgctacctcgcgcacctcaactgcccggtggtcatccccgcggtcgtcggcgaggcg
atcctctccgccgtcaactcctccctcgacacctgggaccagtcggcgggcggcaccctg
atcgagcgcaagctcatcgactggaccaacgagcgcatcggcctcggccccgccgcggac
ggcgtgttcaccagcggcggcagccagtccaacctccaggcgctgctcctcgcccgcgag
gaggccaagtccgacgacctcgccagactgcgtgtcttcgcctccgaggtcagccacttc
agcgtgaagaagtcggcgaaactgctgggcctgagcgcggactcggtcgtctcgatcccc
gtcgaccacgacaagcgcatgcagacggtcgcgctcgcccacgagctggatcgctgcaag
cgcgacggcctgctccccatggccgtcgtcgccaccgccggcaccaccgacttcggctcc
atcgacccgctgcccgagatagccgagctgtgcgcccagttcggcgcctggatgcacgtc
gacgcggcctacggctgcgggctgctcacctccctgaagcaccgggaccggatcgacggc
atcgagcgcgccgactcggtcaccgtcgactaccacaagtccttcttccagccggtgagt
tcgtccgccgtgctggtccgggacgcctccaccctgcgccacgccacctaccacgcggag
tacctcaacccgcgccgcatggtcgaggagcgcatccccaaccaggtcgacaagtccctc
cagaccactcgtcgcttcgacgcgctcaagctgtggatgacgctgcgcgtgatgggcgcc
gacggcatcggccaactcttcgacgaggtctgcgacctggcggccgagggctggaaactg
ctcgccgccgacccgcgcttcgacgtggtcgtggagccgtccctgtccaccctcgtcttc
cgctacatcccggcggccgtcaccgacccggccgagatcgatcgcgccaacctgtacgcc
cgcaaggccatcttcgcctccggcgacgccgtcgtcgcgggcaccaaggtcggcggccgc
cactacctgaagttcaccctgctcaaccccgagaccacggcggacgacatcaccgccgtg
ctcgatctgatcgccggccacgccgagcagtacctgggagaatcccttgaccgcgcttcc
tga
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