Serratia marcescens subsp. marcescens Db11: SMDB11_0077
Help
Entry
SMDB11_0077 CDS
T03985
Symbol
ddlB
Name
(GenBank) UDP-N-acetylmuramate: L-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00470
D-Amino acid metabolism
smac00550
Peptidoglycan biosynthesis
smac01100
Metabolic pathways
smac01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SMDB11_0077 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMDB11_0077 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SMDB11_0077 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smac01011
]
SMDB11_0077 (ddlB)
Enzymes [BR:
smac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SMDB11_0077 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
smac01011
]
Precursor biosynthesis
Amino acid ligase
SMDB11_0077 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
TTL
ATPgrasp_ST
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
CDG10674
LinkDB
All DBs
Position
94205..95125
Genome browser
AA seq
306 aa
AA seq
DB search
MADKVAVLLGGTSAERDVSLQSGAAVLAGLREAGIDAHGVDTRDFPVTQLKDQGFTKVFI
ALHGRGGEDGTLQGLLEFLELPYTGSGVMASALTMDKWRTKMVWQSMGLPVAPYVALNRQ
LYLGAEKAALLARVADLGLPVIVKPSREGSSVGMSKVTESAALEAALEEAFRHDDDVLVE
KWLSGPEYTVAMLGDQVLPSIRIQPAGVFYDYQAKYISDDTQYFCPSGLSAEQEAEMAAL
ALRAYRGLDCSGWGRVDVMQDSDGSFYLLEVNTSPGMTSHSLVPMAARQFGLSFSQLVAR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagttgcagttctgctgggcggcacctccgccgaacgtgacgtttccctg
cagtccggcgctgcggtgctggccgggttgcgcgaagccggcatcgatgcgcacggcgtc
gatacccgcgatttcccggtgacccagctgaaagatcaagggttcaccaaagtgtttatc
gcgctgcacggccgcggcggcgaggatggcaccctgcaggggctgctggagttcctcgag
ctgccttataccggcagcggcgtgatggcctcggcgctgaccatggacaaatggcgcacc
aagatggtgtggcagtcgatgggcttgccggtggcgccttacgtggcgctgaatcgccag
ctgtatctcggcgccgaaaaagcggcgctgctggcgcgcgtggcggatctcggcctgccg
gtgatcgtcaagccgagccgcgaaggctccagcgtcggtatgagcaaggtcaccgaaagc
gctgcgttggaagccgcgctggaagaagccttccgccatgacgacgatgtgctggtggag
aagtggttgagcgggccggaatacaccgtggcaatgctgggcgaccaggtgctgccgtct
atccgtatccagccggccggcgtgttttacgactaccaggccaagtacatttcggacgat
acgcagtacttctgcccgagcggtttgagcgccgagcaggaagccgagatggcggcattg
gcgctgcgcgcctaccgcggtctggactgcagcggctggggccgcgtcgacgtgatgcaa
gacagcgatggcagcttctatctgcttgaggtgaacacctctccgggcatgaccagtcat
agcctggtgccgatggcggcgcgccagtttggattaagcttctcgcagctagtggcgaga
attttggagttggccgactga
DBGET
integrated database retrieval system
