Serratia sp. FGI94: D781_1183
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Entry
D781_1183 CDS
T02433
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
smaf
Serratia sp. FGI94
Pathway
smaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D781_1183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaf03400
]
D781_1183
Enzymes [BR:
smaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D781_1183
DNA repair and recombination proteins [BR:
smaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D781_1183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
AGB81502
UniProt:
L0MDZ7
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All DBs
Position
1240495..1241286
Genome browser
AA seq
263 aa
AA seq
DB search
MPEGPEIRRAADQLAAAILNQPLRDVWFAFPRLQHYQRELIGERVIAIEPRGKALLTHFS
NGLTMYSHNQLYGVWKVAAAGESPATKRELRVRLETAQQAILLYSASDITLGPRGEIEQH
PFLQRIGPDVLDERLTPQQVAERLLSPPFRRRQLGGMLLDQAFLAGLGNYLRAEILWQAQ
LVPQHRPQALTPQALQRLAQALLAVPRLSYHTRGQADDDRHHGALFSFKVFHRSGEPCPR
CGAMIEKTTLSSRPFYFCPVCQR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggaccggaaatacgccgggcggcggaccaactggcggcggcgatcctcaac
cagccgctgcgcgatgtctggtttgcctttccccggctgcaacactaccagcgcgaactg
atcggcgagcgggtgatcgccatcgagccgcgcggcaaagcgttgctgacccacttttcc
aacgggctgacgatgtacagccataaccagctgtacggcgtgtggaaagtggcggcggcg
ggggaaagcccggccaccaagcgtgaactacgcgtgcgtctggagacggcgcagcaggca
attttgctgtacagcgcctcggatatcaccctggggccgcgcggcgaaattgagcaacat
ccctttttgcagcgtatcgggcctgacgtgctggacgagcgtctgacgccgcagcaggtt
gcggaacggctgctgtcgccgccgttccgccggcgtcagctggggggcatgctgctggac
caggcttttctggccgggctgggtaactatctgcgggcggaaattctctggcaggcgcag
ctggtgccgcagcaccggccgcaggcgttaaccccgcaggcgctgcagcggctggcgcag
gcattgttggcggtgccgcgcctttcctaccatacgcgcggacaggcggacgacgaccgt
caccacggcgcgctgttcagcttcaaggtgtttcaccgcagcggcgagccgtgcccgcgc
tgcggcgcgatgattgaaaaaaccacgctgtcgtcgcggccgttctacttctgtccggtc
tgtcagcgctag
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