Serratia sp. FGI94: D781_1920
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Entry
D781_1920 CDS
T02433
Name
(GenBank) transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
smaf
Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smaf03000
]
D781_1920
Transcription factors [BR:
smaf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D781_1920
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AGB82206
UniProt:
L0MHN6
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Position
2022412..2023635
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AA seq
407 aa
AA seq
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MDYEEDGLTNLMQIRAFSQVVAQGSVSRAADELFRTQSAITRSIRDLEQKLAVPLFERHA
SGMLLTDFGKCVLPRARRAIAELHQVPALLARLQGKGAARADSEPLYLFNVRRLQIFVCL
CETRHMQTVATLLGLSQPAISAALKVLENGAGAPLLERTPHGMVPSLAGREIEASIRRAL
NELQHIPADIAARRGVLTGAVRVGALPLGRTRLLPQAIVQLTARYPGVSVVTNESAFSVL
ASELRSGDIDFIFGALRDSDYAADVYSETLFTEEMVLLARRGHPLAQAGLQPSQLKSARW
VLPRSATPARRLLDDCFQAMAMPPPSPVVESGDLALVRGLLLNSDMLAAVSAHQLEHELA
SGELVQLPLALPNTGRAIGLTFRTGSLHSPAAQALIDSLRAQCANIA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggactatgaagaagacgggctgacaaacctgatgcaaatcagagcattcagccaggtt
gttgcgcagggcagcgtttcgcgcgccgccgatgagttattcagaacgcagtcggccatc
acccgctcgattcgcgatctggagcaaaaactggcggtgccgctgtttgagcgccatgcc
agcggcatgctgctgaccgatttcggcaagtgcgtgctgccgcgcgcgcggcgggcgatt
gcggagctgcatcaggtgccggcgctgctggcccgtctgcaggggaaaggggcggcgcgc
gccgacagcgaaccgctgtacctgtttaacgtgcgccggctgcagattttcgtctgcctg
tgcgaaacgcggcatatgcagaccgtggcgacgctgctgggcctgagccagccggcgatc
agcgcggcgttgaaggtgctggaaaacggtgccggcgcgccgctgctggaacgcacgccg
cacggcatggtgccatcgctggccgggcgggagattgaagccagcatccggcgcgcgctg
aatgagctgcagcatattccggcggatatcgccgcccggcgcggggtgctgaccggcgcg
gtgcgggtcggcgcgctgccgctggggcgcacccggctgctgccgcaggcgatcgtccag
ctgaccgcgcgctatcccggcgtcagcgtggtgactaacgagagcgcattttccgtgttg
gcgtctgaactgcgctccggcgatatcgactttattttcggcgcgctgcgcgacagcgac
tatgcggcggatgtgtacagcgaaacgctgtttaccgaggagatggtgctgctggcgcgc
cgtggccatccgctggcgcaggccgggttgcagccgtcacagctgaaaagcgcgcgctgg
gtgctgccgcgttcggccactccggcgcgccgcctgctggacgactgttttcaggcaatg
gcgatgccgccgccgtcgccggtggtggagagcggcgatctggcgttggtgcgcgggctg
ttgctgaattccgatatgctggcggcggtgtcggcgcaccagctggaacatgagctggca
tcgggggagctggtgcagttgccgctggcgctgcccaataccggccgcgccatcggcctg
acgttccgcaccggcagcctgcattcgccggcggcgcaggcgctgatcgacagcctgcgc
gcgcagtgcgccaatatcgcttaa
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