Shewanella maritima: EXU30_14000
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Entry
EXU30_14000 CDS
T06365
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
smai
Shewanella maritima
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smai03009
]
EXU30_14000 (rluD)
Enzymes [BR:
smai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
EXU30_14000 (rluD)
Ribosome biogenesis [BR:
smai03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EXU30_14000 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
Motif
Other DBs
NCBI-ProteinID:
QBF83682
UniProt:
A0A411PJU0
LinkDB
All DBs
Position
3274867..3275841
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AA seq
324 aa
AA seq
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MTQQINLKSEITATQTGLRLDRALAELFPDYSRTRIKEWILSGAVSIDGTTVDKPREKVF
ESQEIAIDATLEEEVHAEAQDIDLNIVYEDDHIIVINKQAGLVVHPGAGNADGTLMNALL
HHHPEIEHVPRAGIVHRLDKDTTGLMVVAKTVEAQTHLVAALQARDIVREYEALVTGTMT
AGGTVDEPIDRHETKRTQMAVVHGGRPSVTHYRVAEKFRAHTRLRLRLETGRTHQIRVHM
AHIGHVLVGDPVYGGRPRPPKKASEEFFDTLKDFKRQALHAVRLELAHPFTCEIMTWHAP
IPDDMVKLTKAMRKDLEENPVEYL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacagattaatctaaaaagcgagatcacagcaacacaaaccggcctaagattg
gacagagcattggccgaattgttccctgattattcccgtacacgcatcaaagaatggatc
ctatctggtgcagttagcattgacggtaccacagttgataagccgcgcgaaaaagttttt
gagtcgcaagaaattgcaattgacgccacgctggaagaagaagtccatgccgaagcccaa
gacattgacctcaacattgtttacgaagatgaccacattatagttatcaacaagcaagct
ggcttggtggttcacccaggtgcgggtaatgccgatggcacgttaatgaatgccttgttg
catcatcaccctgaaattgaacatgtaccgagagctggtattgttcatcgtctggataaa
gacaccacaggtttgatggtggtggctaaaaccgttgaagcgcaaactcacttagtcgcc
gcgctgcaggctcgtgacattgttcgtgaatacgaagcgctagtcactggcactatgaca
gcgggcggcacagtcgatgagccaattgatcgtcatgaaactaagcgcacacaaatggcg
gtagttcatggtggccgtccatcggttacacattaccgtgttgctgagaagtttcgtgcg
cacacgcgtttacgtctgcgccttgaaacaggtcgtactcaccaaattcgtgtgcatatg
gcccatattggtcatgtgttggttggtgaccctgtatatggcggccgcccgcgcccgccg
aaaaaggctagcgaagaatttttcgacactttaaaagatttcaaacgccaagctctgcac
gcggtgcgtcttgaattagcgcacccgtttacctgtgaaatcatgacctggcatgcgcca
atacctgatgacatggttaagctaaccaaagccatgcgtaaagatctggaagaaaacccg
gtcgagtacctttaa
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