Shewanella maritima: EXU30_15945
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Entry
EXU30_15945 CDS
T06365
Name
(GenBank) RluA family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
smai
Shewanella maritima
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smai03009
]
EXU30_15945
03016 Transfer RNA biogenesis [BR:
smai03016
]
EXU30_15945
Enzymes [BR:
smai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
EXU30_15945
5.4.99.29 23S rRNA pseudouridine746 synthase
EXU30_15945
Ribosome biogenesis [BR:
smai03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EXU30_15945
Transfer RNA biogenesis [BR:
smai03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
EXU30_15945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
E1_UFD
Motif
Other DBs
NCBI-ProteinID:
QBF83995
UniProt:
A0A411PKE9
LinkDB
All DBs
Position
complement(3748934..3749587)
Genome browser
AA seq
217 aa
AA seq
DB search
MQVFDYRPPAIPWLDIRYVDRDIIVINKPSGLLSNPGIAAHTHDCALTRLQRVYPDAILV
HRLDCDTSGIMVFARNKKAESSIKTQFQDRLITKEYIAEVNGHLTNESGVIDKSLAADKE
NRPLQKVSADGKVAITNYQVLEQREHSTLVQLLPQTGRTHQLRVHMLALGNVILGDQFYA
NEHVANAKSRLQLHAQRLTFTHPYKKSEVSFYSKHSF
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtttttgattaccgaccacccgccattccatggctcgatatccgttatgttgat
cgcgatatcattgttatcaataaaccttctggcttactgtccaatccgggtattgcagcg
cacacccatgactgcgcactcaccagactgcagcgtgtgtatcctgatgctatattagtg
caccgccttgattgtgatacctcagggattatggtgtttgcccgcaacaagaaagctgaa
tctagcatcaaaactcagtttcaagaccgtttaatcactaaagagtacattgcggaagtc
aacgggcatttaactaatgaatctggcgtaattgataaatcgctcgctgctgataaagaa
aaccgtccgctacaaaaagtatcggcagatggcaaagtcgctattaccaactatcaagtg
ctagagcaacgtgagcacagcacactggttcagctattgccacaaacagggcgcacccat
cagttaagagtgcatatgctagctttgggaaacgttattttaggcgatcagttttatgct
aatgaacacgtcgccaacgcaaaatctaggcttcaactgcacgctcaaaggctaaccttc
actcatccatacaagaaatctgaagtgagtttttacagcaaacatagtttttaa
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