Streptomyces malaysiensis: SMALA_5672
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Entry
SMALA_5672 CDS
T05189
Name
(GenBank) GAF sensor hybrid histidine kinase
Organism
smal
Streptomyces malaysiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
ATG17_like
RNase_Y_N
ApoLp-III
ATG14
OmpH
UPF0242
Motif
Other DBs
NCBI-ProteinID:
ATL85902
UniProt:
A0A291SYE2
LinkDB
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Position
6975186..6980657
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AA seq
1823 aa
AA seq
DB search
MDTAALNRLLTAMTAMRDGNFRKRLTVSGEGVMSEIAAVFNEVADRNLQLTGELTRVRRV
VGREGKLTERLETGACEGQWAAAIDASNALVDDLVRPVSEVGRVLSAVAEGDLEQRMDLR
AQGADGSAHPLRGEFLKVGRTVNGLVDQLSAFTDEVTRVASEVGTEGKLGGQARVRGMSG
SWKDLTESVNTMASRLTAQVRDIALVTTAVAKGDLSRKVTVHVSGEMLELKNTVNTMVDQ
LSSFASEVTRVAREVGTEGELGGQAKVPGVAGVWKDLTDSVNLMAGNLTAQVRGIAQVTT
AVANGDLSQKVTVSARGEVAQLAETINTMTETLRTFADEVTRVASEVGAEGLLGGQAQVP
GAAGTWKDLTDSVNTAFRNLTAQVRDIAQVTTAVANGDLSQKVTVDVAGEMLELKNTVNT
MVDQLQSFGAEVTRVAREIGVEGELGGQAQVPGAAGTWKDLTDSVNTAFRNLTGQVRNIA
QVTTAVANGDLSQKVTVDVSGEMLKLKNTVNTMVDQLSSFADQVTRMARDVGTEGRLGGQ
ARVDGVSGVWKDLTDSVNSMAGNLTAQVRGIAQVTTAVARGDLSQKIEVDARGEILELKN
TINTMVDQLSDFAEQVTRVAREVGTDGRLGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQV
RNIAQVATAVARGDLSQKIDVDARGEILELKNTLNTMVDQLSSFAEEVTRVAREVGTEGQ
LGGQAEVQGVSGTWKDLTQSVNSMANNLTSQVRSIAEVTTAVAMGDLSKKITVDAKGEIL
ELVTTVNTMVDQLSSFAEQVTRVAREVGTEGQLGGQARVPGVTGIWKDLSNNVNLMANNL
TIQVRNISQVSAAVANGDLTKKVTVEARGEVAALADTVNTMVTTLSSFADEVTRVAREVG
TDGILGGQARVPGVSGTWKDLTESVNSMASNLTGQVRNIAMVTTAIAQGDLTKKIDIEAR
GEILELKTTINTMVDQLSSFADQVTRVAREVGTEGQLGGQARVRDVAGTWKDLTESVNEM
AGNLTRQVRAIAEVATAVTRGDLNLKIDVDASGEIQVLQDHINTMIANLRETTLANKEQD
WLKGNLARISGLMQGRRDLEDVARLIMSELTPVVSAQHGAFFLAVPPGEGTDVVADSTSD
DGYELLLVGSYGYSHGSMPTRFKRGETLIGTVAEEKRPILVENVPPGYLKIASGLGEAAP
AHVIVLPVLFEGQLLGVVELASFQPFAQIQKDFLNQIAEMIGTSVNTISVNTKTEVLLKQ
SQELTEQLRERSAELENRQKALQASNAELEEKSERLARQNRDIEVKNTEIEEARQVLEER
AEQLAVSMRYKSEFLANMSHELRTPLNSLLILAKLLADNADGNLSPKQVEFAETIHGAGS
DLLQLINDILDLSKVEAGKMDVSPTRIALVQLVDYVEATFRPLTAEKGLDFSVRVSPELP
ATLHTDEQRLLQVLRNLLSNAVKFTDSGAVELVIRPAGADVPHAIREQLLEHGALRDADA
DMIAFSVTDTGIGIAASKMRVIFEAFKQADGTTSRKYGGTGLGLSISREIARLLGGEIHA
ASEPGRGSTFTLYLPLHPSELPPQGYPQLAPSGAAQSPLALEAFPGGAEEAEEDETAERE
AAHDVSGASPALGGRGGSGLFRRRQRAEQEALRANGEAPPEAEPDPRSAGRRPARQAQAP
EPWLLGGQDLVAPEPAGGFHGEKVLIVDDDIRNVFALTSVLEQHGLQVLYAENGREGIEV
LEQHDDVVLVLMDIMMPEMDGYATTAAIRRMPQFAGLPIIALTAKAMKGDREKSIDAGAS
DYVTKPVDTDHLLTVMEHWMSVE
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
gtggacacggcggccctcaatcggctgctgaccgcgatgacggccatgcgggacgggaac
ttccgcaagcggctcacggtctcgggcgagggcgtgatgtcggagatcgccgcggtcttc
aacgaggtcgcggaccgcaatctccagctcaccggcgagctgacccgggtgcgacgggtg
gtcggccgcgagggcaagctcaccgagcgcctggagaccggcgcctgcgagggccagtgg
gccgccgccattgacgcgtccaacgccctggtggacgatcttgtacggccggtgtccgag
gtgggccgggtgctgtcggcggtcgccgagggcgacctggagcagcgcatggacctgcgg
gcgcagggcgccgacggttcggcgcatcccctgcggggcgagttcctgaaggtggggcgc
acggtcaacggcctggtggatcagctctcggcgttcaccgacgaggtgacgcgggtcgcg
agcgaggtcggcaccgagggcaagctgggtggccaggcccgggtgcgggggatgtcgggc
tcgtggaaggacctcacggagtccgtcaacacgatggcctcccggctcaccgcccaggta
cgtgacatcgctctcgtgaccacggcggtggccaagggtgatctgtcccggaaggtcacg
gtccatgtgtccggggagatgctcgagctgaagaacaccgtcaacacgatggtggaccag
ctctcctcgttcgcctccgaggtgaccagggtcgcccgtgaggtgggcaccgagggcgag
ctcggcggccaggcgaaggtgccgggcgtcgcgggtgtctggaaggacctcaccgactcc
gtcaacctcatggccgggaacctgaccgcgcaggtgcgcgggatcgcccaggtcaccacg
gcggtcgccaatggtgatctgtcgcagaaggtgacggtgagcgcacgcggcgaggtcgcg
cagctggctgagacgatcaacaccatgaccgagacgctgcgcaccttcgcggacgaggtc
acacgggtggccagcgaggtcggcgccgaggggctgctgggcggtcaggcgcaggtgccg
ggtgcggcgggtacgtggaaggatctcaccgattcggtgaacaccgcgttccgcaatctc
accgcgcaggtgcgggacatcgcgcaggtgacgacggcggtggcgaacggcgatctgtcg
cagaaggtcaccgtcgatgtggccggagagatgctggagctgaagaacaccgtcaacacg
atggtcgaccagcttcagtcgttcggcgccgaggtgacccgggtggcccgggagatcggt
gtcgagggcgaactgggcggtcaggcgcaggtgccgggtgcggcgggcacgtggaaggac
ctcaccgattcggtgaacaccgcgttccggaatctcaccggacaggtgcgcaacatcgcg
caggtgacgacggcggtggcgaacggcgacctgtcgcagaaggtcaccgtggacgtctcc
ggtgagatgctcaagctgaaaaacaccgtgaacaccatggtggaccagctgtcctcgttc
gccgaccaggtcaccaggatggcgcgggacgtgggcaccgagggccgactgggcggtcag
gcccgggtggacggggtcagcggcgtctggaaggacctgaccgactccgtcaactccatg
gccgggaacctgacggcgcaggtgcggggtatcgcccaggtgacgaccgcggtcgcgcgc
ggcgatctgtcgcagaagatcgaggtggacgcccgcggcgagatcctcgagttgaagaac
accatcaacacgatggtcgaccagctgtccgacttcgccgagcaggtgacccgcgtcgcc
cgcgaggtgggtacggacggcaggctgggcggtcaggcgcaggtgcccggtgtggcgggc
gtgtggcgcgatctgaccgactcggtgaacggcatggcgggcaatctgaccgcccaggtg
cgcaatatcgcgcaggtcgccacggcggtcgcgcgcggtgacctctcccagaagatcgac
gtggacgcgcgcggcgagatcctggagctgaagaacactctgaacacgatggtcgaccag
ctgtcgtccttcgcggaggaggtcaccagggtcgcccgcgaggtgggcaccgagggccag
ttgggcggccaggccgaggtgcagggcgtctccgggacgtggaaggacctcacccagtcc
gtcaacagcatggccaacaacctgacgtcccaggtgcgttccatcgcggaggtcacgacg
gcggtcgccatgggcgatctgtcgaagaagatcaccgttgatgccaagggcgagatcctg
gagctcgtcaccaccgtgaacacgatggtggatcagctgtcgtcgttcgccgagcaggtg
acccgggtggcccgtgaggtgggcaccgaggggcagttgggcggtcaggcgcgggttccg
ggtgtgaccggtatctggaaggacctgagcaacaacgtcaacctgatggccaataacctg
acgatccaggtgcggaacatctcgcaggtctcggccgcggtggccaacggcgatctgacg
aagaaggtgacggtcgaggcgcgcggcgaggtcgcggcgctggccgacaccgtgaacacg
atggtgacgacgctgtcctcgttcgccgacgaggtcacgcgggtggcgcgcgaggtgggc
acggacggcatcctgggcggccaggcccgggtgcccggtgtctcggggacgtggaaggac
ctcaccgagtccgtgaactcgatggcgtccaacctgaccggccaggtccgcaacatcgcg
atggtcaccacggccatcgcccagggtgatctgaccaagaagatcgacatcgaggcgcgg
ggcgagatcctcgagctgaagacgaccatcaacacgatggtggaccagctgtcgtccttc
gccgaccaggtgacccgggtggcccgtgaagtgggtaccgagggccagctgggcggccag
gcgcgggtgcgggacgtggccggcacctggaaggacctgaccgaatcggtgaacgagatg
gccggcaacctgacccgtcaggtgcgcgccatcgccgaggtcgccaccgcggtgacccgc
ggcgatctcaacctcaagatcgacgtggacgcctcgggcgagatccaggtcctccaggac
cacatcaacaccatgatcgccaacctgcgcgagaccacgctcgccaacaaggagcaggac
tggctcaagggcaacctcgcccggatctccggtctgatgcaggggcggcgcgacctggag
gacgtcgcccggctgatcatgagcgagctgaccccggtggtctccgcccagcacggtgcg
ttcttcctggccgtaccgccgggcgagggcaccgacgtggtcgcggacagcacctccgac
gacggctacgaactgcttctggtcggctcctacggctactcccacggctcgatgcccacg
cgcttcaagcgcggtgagacgctgatcggcacggtcgccgaggagaagcgcccgatcctg
gtggagaacgtgccaccgggctatctcaagatcgcctcggggctcggcgaggcggctccg
gctcatgtgatcgtgttgccggtgctcttcgaggggcagctgctgggtgtggtcgagctg
gcctcgttccagcccttcgcccagatccagaaggacttcctcaaccagatcgccgagatg
atcggcaccagcgtcaacaccatcagcgtcaacaccaagaccgaggtgctgctgaagcag
tcgcaggagctgaccgagcagctgcgcgagcggtcggccgagctggagaaccggcagaag
gccctccaggcgtccaacgcggagctggaggagaagtccgagcgactggcccgccagaac
cgcgacatcgaggtcaagaacaccgagatcgaggaagcccggcaggtgctcgaggagcgc
gcggaacagctcgccgtctcgatgcgctacaagagcgagttcctggccaatatgtcgcat
gagctgcgcaccccgctcaactccctgctgatcctggccaagctgctcgccgacaacgcc
gacggcaatctctcgccgaagcaggtggagtttgccgagaccatccacggcgccggctcg
gacctgctccagctgatcaacgacatcctggacctgtcgaaggtcgaggcgggcaagatg
gacgtcagcccgacccgtatcgccctggtccagctcgtcgactacgtggaggccaccttc
cggccgctgaccgcggagaagggcctggacttctccgtaagggtctcgccggagctcccg
gcgacgctgcacaccgacgagcagcggctgctccaggtgctgcggaacctgctgtccaac
gcggtgaagttcaccgacagcggcgccgtggagctggtcatccggccggcgggcgcggat
gtgccgcacgccatccgggagcaactgctggagcacggtgccctgcgcgacgcggacgcc
gacatgatcgccttctcggtcaccgacaccggtatcggcatcgcggcgagcaagatgcgg
gtgatcttcgaggcgttcaagcaggccgacggcaccaccagccggaagtacggcggcacc
ggactcggcctgtccatcagccgggagatcgcccggctgctcggtggcgagatccacgcg
gccagcgagcccggccgcggctcgaccttcacgctctacctgccgctgcaccccagcgag
ctgccgccgcagggctatccgcagctcgctccgagcggcgcggctcagagcccgctggcg
ctcgaggcgttccccggcggcgcggaggaggccgaggaggacgagacggcggagcgggag
gccgcacacgacgtctcaggcgcttccccggcgttgggcggccgtggcggctccgggctg
ttccgacggcgtcagcgggccgagcaggaggcgttgcgggccaatggggaggcgccgccg
gaggcggagccggacccccggtcggcgggccgccgcccggcacggcaggcgcaagccccc
gagccgtggctgctgggcggtcaggacctggtggccccggagccggcgggcggcttccac
ggcgagaaggtgctgatcgtcgacgacgacatccgtaatgtcttcgcgctgaccagtgtg
ctggagcagcacgggctccaggtcctgtacgcggagaacggccgggagggcatcgaggtc
ctggagcagcacgacgacgtggtgctcgtcctgatggacatcatgatgccggagatggac
ggctacgccacgaccgccgcgatccgcaggatgccccagttcgccgggctgccgatcatc
gccctcaccgcgaaggcgatgaagggcgaccgggagaagagcatcgacgcgggcgcgtcg
gactacgtcaccaagccggtcgacaccgatcatctccttacggtgatggagcactggatg
tcggtggagtga
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