Serratia marcescens SM39: SM39_3604
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Entry
SM39_3604 CDS
T03592
Symbol
lpdA
Name
(GenBank) lipoamide dehydrogenase, E3 component is part of three enzyme complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
smar
Serratia marcescens SM39
Pathway
smar00010
Glycolysis / Gluconeogenesis
smar00020
Citrate cycle (TCA cycle)
smar00260
Glycine, serine and threonine metabolism
smar00280
Valine, leucine and isoleucine degradation
smar00310
Lysine degradation
smar00380
Tryptophan metabolism
smar00620
Pyruvate metabolism
smar00630
Glyoxylate and dicarboxylate metabolism
smar00640
Propanoate metabolism
smar00785
Lipoic acid metabolism
smar01100
Metabolic pathways
smar01110
Biosynthesis of secondary metabolites
smar01120
Microbial metabolism in diverse environments
smar01200
Carbon metabolism
smar01210
2-Oxocarboxylic acid metabolism
smar01240
Biosynthesis of cofactors
Module
smar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smar_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
smar_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SM39_3604 (lpdA)
00020 Citrate cycle (TCA cycle)
SM39_3604 (lpdA)
00620 Pyruvate metabolism
SM39_3604 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SM39_3604 (lpdA)
00640 Propanoate metabolism
SM39_3604 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SM39_3604 (lpdA)
00280 Valine, leucine and isoleucine degradation
SM39_3604 (lpdA)
00310 Lysine degradation
SM39_3604 (lpdA)
00380 Tryptophan metabolism
SM39_3604 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SM39_3604 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smar04147
]
SM39_3604 (lpdA)
Enzymes [BR:
smar01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SM39_3604 (lpdA)
Exosome [BR:
smar04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SM39_3604 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
HI0933_like
AlaDh_PNT_C
NAD_binding_8
Thi4
FAD_binding_3
DAO
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BAO35553
LinkDB
All DBs
Position
complement(3718472..3719896)
Genome browser
AA seq
474 aa
AA seq
DB search
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKVRVWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLVVEGENGPTTINFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALELKTVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKQFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGVEVDERGFINVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaattaaaactcaggtcgtggtacttggggcgggcccggcaggttactct
gcagcctttcgttgcgctgacttaggtcttgaaaccgttctggttgaacgttattccact
ctgggcggggtttgcctgaacgtgggatgtatcccttccaaagcactgctgcacgttgcc
aaagtgatcgaagaagccaaagcgctggccgaacacggcatcgttttcggcgagccgaaa
accgacatcgacaaagtgcgcgtctggaaagaaaaagtcatcactcagctgaccggcggt
ctggctggcatggcgaaaggccgtaaagtgaaagtggtcaacggcctgggcaagttcacc
ggcgctaacaccctggttgttgaaggcgaaaacggcccaaccaccatcaacttcgacaac
gccatcatcgctgcaggttctcgtccgatccaactgccattcattcctcatgaagatcca
cgcgtgtgggattccaccgatgcgctggagctgaaaaccgtcccagagcgtctgctggtt
atgggcggcggcatcatcggcctggaaatgggcaccgtataccatgcgctgggttcacag
atcgacgtcgttgagatgttcgatcaggttatcccggcggcagataaagacgtggtgaaa
gtcttcaccaaacgtatcagcaagcagttcaacctgatgctggaaaccaaagtgaccgcg
gtagaagccaaagaagacggcatctacgtcacgatggaaggtaaaaaagcgccggcagaa
ccacagcgttacgacgcggtgctggtggcgatcggccgcgtgccgaacggcaaactgctg
gatgccggcaaagccggtgttgaagttgacgagcgtggcttcatcaacgtcgacaaacag
ctgcgcaccaacgtgccgcacatcttcgctatcggcgacatcgtcggtcagccgatgctg
gcgcacaaaggcgtgcacgaaggccacgttgccgcagaagttatcgccggcatgaagcac
tacttcgatccgaaagtgatcccatccatcgcttacaccgagccggaagtggcatgggtg
ggtctgaccgagaaagaagcgaaagagaaaggcatcagctacgaaacctccaccttcccg
tgggcggcttccggccgtgcgatcgcttccgactgtgcagacggcatgaccaaactgatc
ttcgacaaagaaactcaccgcatcatcggtggcgcgattgtcggcaccaacggcggcgaa
ctgctgggtgaaatcggtctggctatcgagatgggctgcgacgcggaagacatcgcgctg
accatccacgctcacccgaccctgcacgaatccgtgggcctggcggcggagatctacgaa
ggcagcatcaccgacctgcctaacccgaaagccaagaagaagtaa
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