Scophthalmus maximus (turbot): 118289361
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Entry
118289361 CDS
T09850
Symbol
ddx47
Name
(RefSeq) probable ATP-dependent RNA helicase DDX47
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smau03009
]
118289361 (ddx47)
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118289361 (ddx47)
Ribosome biogenesis [BR:
smau03009
]
Eukaryotic type
90S particles
Helicases
118289361 (ddx47)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
SWI2_SNF2
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
118289361
NCBI-ProteinID:
XP_035472206
EnsemblRapid:
ENSSMAG00025017955
LinkDB
All DBs
Position
17:complement(5894337..5899855)
Genome browser
AA seq
519 aa
AA seq
DB search
MADDSEETVKPNTDETLEHGSSSDDDDHGDVKGAESEAAVKSFKDLGVTEVLCEACDQLG
WKSPTKIQVEAVPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQRLHTLVLTPTRE
LAFQIAEQFEALGSSIGVKCAVVVGGIDMMSQSLVLAKKPHIVIATPGRLIDHLENTKGF
SLRALKFLVMDEADRILNMDFETEVDKILKVIPRERRTFLFSATMTKKVQKLQRAALKDP
VKCAVSTKYSTVEKLQQYYIFIPSKYKDCYLVSILNELAGNSFMIFCSTCNNAQRVALLL
RNLGITAIPLHGQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTH
SKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIESLIGKKLPAFPTQEDEVMMLVERV
SEAQRFARLEMKEQGEKRKRPRGGDGDEDDTEQASGVRKKVRGGGGGGGRGGGGRGGGGR
GGGGGRGGGGGGRGGGGRGGGEGGGGMKRRGAAAWRGGR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacagcgaggagaccgtgaagccaaacacagacgaaacactggagcatggc
tcgagcagtgacgatgacgaccacggcgacgttaagggcgctgaaagcgaagcggcggtg
aagagcttcaaggacctgggggtcaccgaggttctgtgtgaggcgtgtgatcagctggga
tggaagagtcccaccaagatccaggtagaagctgtgccagtggccctgcaagggaaggac
gttatcggcctggcagagactggctcaggaaagacgggcgcctttgctctgcccatcctc
cagtcgctgctggcctccccccagaggcttcacaccctcgtcctcacgcccaccagggag
ttggcgtttcagatcgctgagcagtttgaggccttgggctccagcatcggtgttaagtgt
gctgtcgtagtcggtgggattgatatgatgtcccagtcgttggtgttggccaagaaacca
cacattgttattgccacacctgggcggttgatagaccacctggagaacaccaagggcttt
tccctacgagctctgaagttcctggtcatggacgaagctgacagaatcctcaacatggat
tttgagactgaggtggataagatcttgaaggtgattcccagagagagacgcaccttcctg
ttctccgccaccatgaccaaaaaggtccagaaactacagagagcagctctgaaagatccc
gtgaagtgtgcagtgtccaccaagtactctacagtggaaaagctgcagcaatactacatc
ttcataccatccaagtacaaggactgttacctggtgtccatcctgaacgagctggccggt
aactcgtttatgattttctgtagcacgtgtaacaatgcccagcgggtggcgctgttgtta
aggaaccttggaatcactgcaatccctcttcatggacagatgagtcagaataaacgtcta
ggagcactaaacaagttcaagtccaagtctcgatcagtgctgctggcgaccgatgtggca
tccagagggttagacattcctcatgttgactgcgtcattaactacgacatccccactcac
tctaaggactacatccatagagttggccgaacagccagagcaggccggtctgggaagtcc
atcacttttgtaactcagtatgacgtggagctgttccagcgaatcgaaagcctaattggg
aagaaacttcctgctttcccaacccaggaagatgaagtgatgatgctagtggagagagtg
agcgaagctcagagatttgccaggctggaaatgaaggagcaaggcgagaagagaaaaagg
cccagaggaggagatggagatgaagatgatacagagcaagcaagcggagtgaggaagaaa
gtgagaggtggaggaggaggagggggaagaggaggagggggaagaggaggagggggaaga
ggaggaggaggagggagaggaggaggaggaggaggaagaggaggagggggaagaggagga
ggagaaggaggaggagggatgaagagaaggggtgcagctgcctggaggggagggcggtga
DBGET
integrated database retrieval system
