Scophthalmus maximus (turbot): 118299190
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Entry
118299190 CDS
T09850
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118299190 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118299190 (exosc5)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118299190 (exosc5)
BRITE hierarchy
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
118299190
NCBI-ProteinID:
XP_035478591
EnsemblRapid:
ENSSMAG00025011965
LinkDB
All DBs
Position
11:5976571..5980013
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AA seq
240 aa
AA seq
DB search
MRGKQMTSSPRDEPLFHGGGVMEACDSSRVSLREFGCEQNLLSRPDGSASFIHGDTSVYA
GVYGPAEVKVSKEIYDRATLEVLIQPKVGLPSVRERSQEQCVRETCEASLLLSLHPRSSL
TLILQVLHDDGSLLSCFLNAACMALMDAGLPMSCLFCGVTCAIDADGQIITDPTAAQEKE
SRALMTFAIDSTQRNVLMSSTKGSFSVNELQQCIAVSQTASEKIFQFYRDSVQRRYSKTL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtaaacagatgacgtcatccccccgcgacgaaccacttttccatggtggcgga
gtgatggaggcgtgcgactcttcacgcgtttccctgagagagttcggctgtgagcagaac
ctcctgtcgcgtcctgacggatcagcgtccttcatccatggagacacaagtgtgtacgct
ggagtgtatggaccggctgaggtcaaagtgagcaaagagatctatgaccgggcaacgttg
gaggtgttgatacagcccaaagtgggactgccaagtgtaagggagcgatcacaggagcag
tgtgtgcgagaaacctgtgaggcatctctgctcttgtcgcttcacccccgctcctccctc
actctcattctgcaggtgttgcacgatgacggttcactcttgtcctgctttttgaatgca
gcctgtatggctctcatggatgcaggcctgcccatgagttgcctgttctgtggagtgacc
tgtgccattgacgcagacggtcaaatcatcacagatcccactgcagctcaggaaaaggaa
agtcgagctttgatgaccttcgctattgacagcacacaacgcaatgtactgatgtcatca
accaaaggatcgttttcagtcaatgagctgcagcagtgtatagcagtcagtcagacggcg
tcggagaagattttccagttctacagggactctgtccagcgacgatactccaaaacccta
tga
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integrated database retrieval system
