Scophthalmus maximus (turbot): 118312704
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Entry
118312704 CDS
T09850
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
smau04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118312704
04020 Calcium signaling pathway
118312704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118312704
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118312704
BRITE hierarchy
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
118312704
NCBI-ProteinID:
XP_035493425
EnsemblRapid:
ENSSMAG00025009165
LinkDB
All DBs
Position
8:complement(2711799..2888475)
Genome browser
AA seq
2397 aa
AA seq
DB search
MQGPRTELKQEEARLQRSPRLRLPTVIICQHGVWRAAPDRWVAMTSEEEEGPSVATSTAA
TPSAAAISRAATAVSRGDGDDAVTSSSPRRPSPHRRRPRPEEKEEKEEEVEEEGIIREEQ
EGRIEEEEVVECDEEDGSSDTSVLVVPYPELVPVVFFCLKQTTFPRSWCIRMVSSPWFER
VSMMVILLNCVTLGMYQPCENIDCSSDRCQILQAFDAFIYIFFALEMVIKMVALGIFGRR
SYLGDTWNRLDFFIVMAGMVEYSLDLQNVNFTAIRTVRVLRPLKAINRVPSMRILVNLLL
DTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYLEENFTLTTGISLPRPYYMADED
DERPFICSLPVDNGIMSCSDVPARREGGRACCLDKDDALYRQSLGLSPEPLTNGSVSVAG
LCVNWNRYYTRCHTGHSNPHKGAINFDNIAYAWIVIFQVITLEGWVEIMYYVMDAHSFYN
FIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRARCTSSSTLASEPGDCYE
ALFQLVCHCLRKARRQAVALFYTLRGKPRGFRGVGRGRGGGEGRERKANGRDGRERRAMR
RHGPPCPHHNKPDHASPGQPMALAATAAATSVSDGCRRCAAALMLADGVGPVRSAAAGGE
SEEGAVEETDREGVQPGVSEKGKKDQDGARRHGGCSPRKRCTELWHNTRMKLWGIVESKY
FNRGIMIAILINTISMGIEHHEQPEELTNVLEICNIVFTSMFSLEMILKLTAFGSFSYLR
NPYNVFDGVIVIISVCEIVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDN
VATFCMLLMLFIFIFSILGMHIFGCKFSLKTETGDTVPDRKNFDSLLWAIVTVFQILTQE
DWNVVLYNGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDDERS
SSNFDESERHDSIKLSDPRICTLTPNGHLELGALSGPRGSYSSERRSFAIESMKSSVLSL
GKSSLERRSLSLRHGRSSNYHNWGRPLPPQSAWSRRSSSNSLGRRSYRFSGAPLVGGSLR
VHSTRSPHSYPYAAEQESLLSHAPHSHHPLLPPHPPPPPPPLFLSRHFAGKWDRRALSLE
LPELLGAGAQPPGPPPAHVPDPGSSSRRSGSGAAGSVTAGSAAGSGFGGEHRDCNGKAPG
PHAHLMAEVFPQVNARKDRTDLDEETDYSLCFRVQKMTEVYKPDWCESREEWSVYLFSPR
NKFRLLCQSIIAHKLFDYVVLAFIFLNCITVALERPRILQGSLERLFLTISNYIFTAIFV
TEMTVKVVSMGLYLGEKAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLR
TLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCVGF
DVKNITNKSDCLAANYRWIHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQ
PLTNNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRME
KKRRKAQKLPYYASYGHIRLAIHTLCTSHYLDLVITFIICINVITMSLEHFSQPRSLETA
LKYCNYFFTSTFVIEATLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINASLP
INPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGV
ELFGELVCNADYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGHPGA
DYGCHAGLQFISPLYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELEL
AQGGLCCMMGGIGAIAGATGAAASGAGVGGACVGGGVSSAIAAGTVAGGPRGVGVMAPPR
DGGGGGGGAAAHEGHARHRCRLYSPAQESQWLDSVSLLIKDSLEGDMIDNLSGSVFHHYC
SHPVCKDCKSHPQEIRLAEVEQASLMSEQLSDKSSSPALPDDLSLDEHSSYQLLVRESQI
GSSDSHSSEETPTHQVGYRGLRPSSSGSEDGVQELLEVGVHPRLSPPSLEQQSPARCTGD
RDGDGESRSGGGGGGESSPVFHLPADFFHPAAAAHPGSPGNGVNPGDRGPSTLASPASWA
SLRSPAANSRPLSSQHPSHSDSSLATGSSEGSLQTTLEEGLSFSASPPRGLDLAAPLPGH
RSHPPAPVAADQGDLSLKRRGTTLTLKATRGHQRSQSSSGGGGGSTSPGCPRQDSVDPSD
EDVGTGAGTGGDGCRQTFDSEQLSETLNSLSLTSLLTPRPLTPPLVKKCNSTGSLDQTNV
SGRSKVGRHVCGVDAHGYLSNPWTEGRARGEEEDSDITGFSVESGGRPADTTLRKNR
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaccacgaactgagttgaagcaggaagaggctcgtctgcagaggtccccccgc
ctgaggctcccgacagtcatcatctgtcaacatggcgtgtggcgcgcagctccagaccgt
tgggttgccatgacgagcgaggaggaggagggccccagcgttgcaacatcaacagcggcg
acaccgtcggcggcagcgatctccagggcggcgacagccgtatccaggggcgacggcgat
gatgctgtcacttcctcctccccccgcagaccctccccgcaccgccgtcgcccgcgtccc
gaggaaaaggaagagaaagaggaggaagtagaggaggaagggattattcgagaggaacaa
gaaggaaggattgaggaggaggaggtggtggagtgtgatgaagaagatggcagcagtgac
accagtgtgttggtggtgccctaccctgagctggtacctgtggtcttcttctgcctcaag
caaacgaccttcccccgcagctggtgcatccgcatggtctccagtccctggttcgagcgc
gtcagcatgatggtgatcctgctgaactgcgtgaccctggggatgtaccagccctgtgag
aacatcgactgctcctcggaccgctgccaaattctacaggcctttgatgcgttcatctac
atcttcttcgctctggagatggttataaagatggtcgccctgggaatcttcggccgccgc
agttacctcggggacacgtggaaccgactggatttcttcatcgtcatggcagggatggtc
gaatactcgctggacctgcagaacgtcaacttcacggccatcaggacggtgcgagtgctc
cggcctctcaaggcgatcaacagggtgccaagcatgcgcatcctggtgaacctgctgctg
gacaccctgcccatgctgggcaacgtcctcctcctctgcttcttcgtcttcttcatcttc
ggcatcatcggggtgcagctgtgggccgggctgctgcgcaaccgctgctacctggaggag
aacttcacgctcacgacgggcatcagcctgccgcggccctactacatggcggacgaggac
gacgagcggcccttcatctgctcactgccggtcgacaacggcatcatgtcgtgctccgac
gtgccggcccgccgcgagggcggcagggcgtgctgcctggacaaggacgacgccctgtac
cgccagtcgctgggcctgagccccgagccgctgaccaacggcagcgtgagcgtggcgggg
ctctgcgtcaactggaaccgctactacacccggtgtcacaccggacacagcaacccgcac
aagggggccatcaactttgacaacatcgcctatgcctggattgtcatcttccaggtgatc
actctggagggctgggtggagatcatgtactatgtgatggacgcgcattcgttctacaac
ttcatctacttcatcctgctgattattgtgggctccttcttcatgatcaacctgtgcctg
gtcgtcatcgccacccagttctcggagaccaagcagcgggagcaccagctgatgcaggag
cagcgggcgcggtgcacgtcctcctccaccctggccagcgagccgggcgactgctacgag
gcgctcttccagctggtctgccactgcctgcgcaaggccaggcggcaagccgtcgccctc
ttctacaccctgcgggggaagccccgcggcttccggggcgtggggaggggcaggggagga
ggggaagggcgggagaggaaggccaacggacgagatggacgcgagaggagagcaatgcgg
aggcacggtcctccctgtccccaccataataaacctgaccacgcctcacccggtcaaccc
atggcgctcgccgccaccgccgccgccacctccgtgtccgacggctgccgtcggtgcgcc
gcggcgctgatgctcgccgacggtgtcgggccagtccgcagcgccgcagccggcggggag
tcggaggagggagctgtggaggagacggacagggagggggtacagcccggggtcagtgag
aagggcaagaaggaccaggacggcgcacggcgccacgggggctgcagtcccaggaagcgc
tgcacggagctgtggcacaacaccaggatgaagctgtggggcatcgtggagagcaagtac
ttcaaccggggcatcatgatcgccatcctgatcaacaccatcagtatgggcatcgaacac
cacgagcagccggaggagctcaccaacgttctggagatctgcaacatcgtcttcaccagc
atgttctccctggagatgatcctcaaactcacggccttcggctctttcagctacctgcgg
aacccctacaacgtctttgacggagtcatcgtcatcatcagcgtgtgcgagatcgtcggc
cagtcggacggcggcctgtccgtgctgaggaccttccggctgctgcgggtgctgaagctg
gtcaggttcatgccggcgctcaggagacagctggtggtcctcatgaagaccatggacaac
gtggccaccttctgcatgctgctcatgcttttcatcttcatcttcagtatcctggggatg
cacatcttcggctgtaagttcagtctcaagaccgagaccggcgacacggtaccagacagg
aaaaactttgactcgctcctctgggccatcgtcaccgttttccagattctgacccaggag
gactggaacgtggttctgtacaacggtatggcagctacctcgccgctggccgctctttac
tttgtggccctcatgacctttggaaactacgtcctcttcaacctgctggtggccatcttg
gttgagggctttcaggcagagggtgatgccaatcgctcgtattcggacgacgagcgctcc
tcttccaactttgacgagagcgagagacacgactccataaagttgtctgacccgaggatc
tgcaccctgacgcccaacggccacctggagctcggcgccctctcggggccccggggatcc
tattcctccgagaggcggagcttcgccatcgagtccatgaagagcagcgtgttgagcctg
ggcaagagcagcctggagagacgctccctctctctgcgccacgggcgtagttccaactac
cacaactgggggcgccctctcccccctcagtctgcatggagccgcagatccagctccaac
agcctgggtcggaggagctacaggttcagcggggctcctctggtcgggggcagcctccgc
gtgcacagcacccgctccccccactcctacccctacgccgccgagcaggagtccctcctc
tcccacgcgccccactcccaccaccctctgctgcctcctcatccgccgccgccgcccccg
ccgctgttcctctccagacactttgccggcaagtgggatcgccgggccctctccctggag
ctcccggagctcctcggggcgggcgcgcagccccccggcccgccgcccgcccatgtcccg
gaccccggcagcagcagcaggaggagtgggtccggggcggcgggatccgtcaccgcgggg
tccgcggctggcagcggcttcggaggggagcaccgggactgcaacggcaaggcgccgggt
ccccacgcccacctgatggccgaggtgttcccccaggtcaacgcgcggaaagaccgaacg
gacctcgacgaggagacggactatagtctttgcttccgggtgcagaagatgacggaggtg
tacaagccagactggtgtgagagcagggaggagtggtccgtctacctcttctccccccgg
aacaagttcaggctcctctgtcagtccatcatcgcccacaagctcttcgactacgtggtc
ctggccttcatcttcctcaactgcatcaccgtggccctggagcggccgaggatcctgcag
ggcagcctggagagactcttcctcaccatctccaactacatctttacggccatttttgtc
acggagatgactgtcaaggtggtgtccatgggtctgtacctgggggagaaggcctatctg
aggagcagctggaacatcctcgacggcttcctggtcttcgtctctctgattgacatcgtg
gtgtccatggcgggcggggccaagatcctgggcgtgctgcgcgtcctccggctgctcagg
acattgcggcccctcagggtgatcagcagagctccagggctgaagctggtggtggagacc
ctcatcacgtccctcaagcccatcggcaacattgtcctcatctgctgcgccttcttcatc
atctttggcatcctcggtgttcagctcttcaaaggcaagttctactactgtgtgggcttc
gacgtgaagaacatcaccaacaaatccgactgtctggctgccaactatcgatggattcac
cacaagtacaactttgacaaccttggacaggctctgatgtccctgtttgtactcgcctcc
aaagacggttgggtcaacatcatgtaccacggcctggacgccgtgggaatcgaccagcag
ccgctgaccaacaacaatccgtggatgctgctctacttcatctccttcctcctgatcgtc
agcttcttcgtcctcaacatgttcgtgggcgtggtggtggagaacttccacaagtgccgg
cagcaccaggaggtggaggaggccaagcggcgcgaggagaagcgccagcgccgcatggag
aagaagaggagaaaggcccagaagctgccctactacgcgtcgtacggccacatccgcctg
gcgatccacaccctgtgcaccagccactacctggatctggtcatcaccttcatcatctgc
atcaatgtcatcaccatgtccctggagcacttcagccagccgcggtctctggaaaccgcg
ctgaagtactgcaactacttcttcacctccaccttcgtgatcgaggccactctgaaactg
gtggcctttggcttccgccgcttcttcaaggacaggtggaaccagttggacctggccatt
gtgctgctgtccgtcatgggcatcaccctggaggagattgagatcaacgcctcactccca
atcaaccccaccatcatcaggatcatgagggtgctccggatagcacgagtgctgaagttg
ttgaagatggcgacggggatgagagctctgctggacacggtggtccaggctcttcctcag
gtggggaacctcggcctgctcttcatgctgctgttcttcatctacgctgctctgggagtg
gagctgtttggagagctggtgtgcaacgccgactacccctgcgaggggatgagccgccac
gccacctttgaaaacttcggcatggccttcctcacgctcttccaggtttccaccggtgac
aactggaacggcatcatgaaggacacactcagggagtgcccgccaggtcacccgggcgcc
gactacggctgccacgccgggctgcagttcatctcgccgctgtatttcgtgtccttcgtg
ctcacggcccagttcgtgctgatcaacgtggtggtggccgtgctcatgaagcacctggac
gactccaacaaggaggcgcaggaggacgccgagatggacgccgagatcgagctggagctg
gcccaggggggcctctgctgcatgatgggcggcatcggcgccatcgccggggccacgggc
gccgccgccagcggggcgggcgtgggcggggcatgcgtgggcggaggagtgtccagtgca
atcgcggcggggacggttgcagggggaccccgaggtgtcggggtgatggcgccgccgcga
gatggaggcggaggaggaggcggagcagcggctcacgagggacacgctcgccatcgctgt
cggctctactctccagctcaggagagccagtggctggacagtgtgtctctgctgattaag
gactcattggaaggcgacatgatcgacaacctctccggctcagttttccaccactactgc
tctcaccccgtctgcaaggactgcaagagtcacccgcaggagatccgattggccgaggtg
gagcaggcgtctctcatgtcggagcagctgtccgacaagtcgtcgtctccggcgctgccc
gatgacctcagcctcgacgagcacagcagctaccagctgctggtcagggagagccagatc
ggcagcagtgactcccacagttcagaggagacgcccacacaccaggtgggctacaggggg
cttcgtccgtccagctcagggagcgaggacggcgtccaggagctgttggaggtgggcgtc
catccccggttgagtcctccatcgctggagcagcaaagcccggcacgctgcacaggtgac
agagatggtgatggagaaagtcgcagtggaggcggaggtggaggcgagtcctcgcccgtc
ttccatctaccggcggatttcttccacccggctgcggcggctcatccaggcagtcccggg
aacggtgtcaacccaggggacagggggccgtcgacgttggcctccccggcctcctgggcc
tccctccgctcacccgcagccaacagcaggcccctgagctcccagcacccgtcccacagc
gactcctccctggccacgggcagctcagagggcagtctgcagaccactctggaggagggt
ctcagcttcagcgcctcgccgccgcggggtctggatctcgccgcgcccctccccggccac
cgctcacatcccccggcaccggtcgcggcggaccagggcgacctttcactaaagagacgc
ggcaccacgttgactctcaaagccaccagggggcaccagaggagccagagcagcagcggc
ggcggcggcggcagcaccagccccggctgtccccggcaggactccgtggacccctcggac
gaggacgtgggcacgggggcggggacgggcggggacggctgccgtcagacctttgacagc
gaacaattgtcggaaacactgaacagcctctcgctgacgtcgctgctcaccccgcgccct
ctcacgcccccgctggtgaagaagtgtaacagcacgggctctctggaccaaaccaatgta
tccggccggagtaaagtgggacgccacgtgtgcggcgtggatgcccacggttacctgtcc
aacccctggacagaaggaagggcgaggggcgaggaggaggacagtgatatcacaggcttc
agcgtggaaagcggcggccgacccgcagacacaaccttgaggaaaaatagatga
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integrated database retrieval system
