Shewanella marisflavi: CFF01_03920
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Entry
CFF01_03920 CDS
T05400
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
smav
Shewanella marisflavi
Pathway
smav00061
Fatty acid biosynthesis
smav00071
Fatty acid degradation
smav01100
Metabolic pathways
smav01212
Fatty acid metabolism
smav02024
Quorum sensing
Module
smav_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CFF01_03920
00071 Fatty acid degradation
CFF01_03920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFF01_03920
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smav01004
]
CFF01_03920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smav04147
]
CFF01_03920
Enzymes [BR:
smav01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CFF01_03920
Lipid biosynthesis proteins [BR:
smav01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
CFF01_03920
Exosome [BR:
smav04147
]
Exosomal proteins
Exosomal proteins of breast milk
CFF01_03920
Exosomal proteins of breast cancer cells
CFF01_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ASJ95806
LinkDB
All DBs
Position
complement(873561..875156)
Genome browser
AA seq
531 aa
AA seq
DB search
MDYDSYTHVDLDKYGSLIDLIETAAKRFGDKTAYVCLGKASSFADIERDSRYFAAYLQQH
TQLKAGDKIAIQLPNITQFVIAAYGALRAGMVLVNTNPLYTQRELIHQYNDSGAKALVVL
SDLLPTLEQVIPATQVETLIATHALDLIAPQPLVDSPLAPVSFEQVLTLGSQSDYRQVKV
AQESLAALQYTGGTTGLSKGAMLSHSNLLANMLQVQSRLSSKFVEGEEIFIAPLPIYHIY
AFMVNFVYFEQGGCSVLIPNPRDISALIQTMSQHAFTGFAGLNTLFVGLCHQKAFQGLDF
SHLKITISGGTALTQAAASIWQTTTGCTISEGYGLSETSPVVSLNAPGLECLGTIGRPVI
YTQVKIIDANEQEVPHGEVGELAVKGPQVMRGYWQKPDETAKVMTQDGFFKTGDIALATD
NGMHKIVDRMKDMINVSGFNVYPNEVEDVLSAHESVLECAVIGVEDSRSGEAVKAAIVLR
DPKSDHQMTQEALLAHCREQLAGYKVPKIFEFMAALPKSTVGKILRRELRQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggattatgattcgtatacccatgtcgatctggacaaatatggctcactgatcgatctg
atcgaaaccgctgctaagcgctttggcgataagacagcctatgtctgtctgggtaaagcc
agcagctttgccgatatagaacgcgactcccgctacttcgccgcctacctgcaacaacat
acccagctgaaggctggcgacaaaattgccatccagctgcccaacattacccaatttgtt
atcgccgcctatggggcgctaagagccggaatggtattggtcaacactaaccccctctat
acccaaagggagttgatccatcaatacaatgattctggagcaaaggccttggtggtgctt
agcgatctgctaccgacactggagcaggtgatcccagccacccaagttgagacccttatc
gccacccatgccctcgatctcatcgcgcctcagccccttgtcgacagcccgttggccccc
gtgagttttgagcaggtgttaaccctgggcagccaatctgattatcgccaagttaaggtg
gcgcaagagagcctggcggcgctgcaatacacaggtggcaccacaggcctgtcgaaaggc
gctatgctgagccacagcaacctgctggccaatatgctgcaggtacaatcacgcctgtcc
agtaagtttgtcgagggcgaagagatcttcatcgcaccattacccatctatcatatctat
gcctttatggtgaattttgtctactttgaacagggcggctgtagcgtactcatcccaaat
ccgagagacatcagcgctttgatccaaaccatgtcacagcatgcgtttaccggattcgcc
ggactcaacaccctgtttgttggcctgtgccatcaaaaggcctttcaaggactggatttc
agccaccttaagatcactatctccggcggcacagcactgacccaggcagcagcatccata
tggcaaaccactacaggctgcaccatctccgaaggctatggtttgtcagaaacctccccc
gtggtctcgctcaacgcccccggccttgagtgtcttggcaccataggccgccccgtgatt
tacactcaggtcaagatcatcgacgccaatgaacaagaggtcccccacggagaggtcggc
gagctggcagtcaaaggtccgcaggtgatgagaggctactggcaaaagccggacgagacc
gccaaggtgatgacccaggacggcttcttcaagacaggagatattgccctggccactgat
aatgggatgcataagatagtggatcgcatgaaagatatgatcaatgtctccggctttaac
gtctaccctaacgaggtggaagatgtgctatcggcccatgagagcgtactggaatgtgct
gtcattggcgtcgaagatagccgcagcggcgaggccgttaaggccgccatcgtgctgaga
gaccctaaatctgatcaccagatgacccaagaggcgctgctagcgcattgccgcgagcaa
ttggcaggttacaaggtgccgaagattttcgaatttatggccgccttacctaaatcgacc
gtgggcaaaatactacgcagagagctaagacaatag
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