Shewanella marisflavi: CFF01_07030
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Entry
CFF01_07030 CDS
T05400
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smav03400
]
CFF01_07030
DNA repair and recombination proteins [BR:
smav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFF01_07030
Archaeal homologous recombinant proteins
CFF01_07030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
nSTAND3
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
ASJ96360
LinkDB
All DBs
Position
1601590..1604646
Genome browser
AA seq
1018 aa
AA seq
DB search
MRPLRLTMTAFGPFADEQTIDFNALGSNPLFLINGPTGAGKTTILDAICFALYGKTTGDE
REGTQMRCDMADSQRLTQVSFEFELGTNRYLIRRVPEQSRAKKSGDGVTQQKSEAQLSQF
DADGKETLLVAAKVSDATAQIEQLTGLDVDQFRQVMVLPQGKFRELLMADSKAREKIFSQ
LFQTHIYRRIEDKLKQQAAGIRKEVEAMRNRRSGILEGAELESDQALLDEQTRLAPELQK
AESDKLAREKALLEANQQLDKGMKLQADFNRLQALQQEGEELKTRQAEATLWQQRLQAAQ
RANNLSPLYQAMQSRLGEQQAATKLRDERQQTLQTALQALAQSQQAFEQLGELEAQQLSQ
QQRLTQLEALAPQLEQLTQLSQRLTELQGKMLAAETSGKQSAQQLEALKQARQEMLGRRE
LLKREAEPQLSLQQSLNDARIQLKVFERWQQQQHEVAAIGHKLEAAKAAGSELAGKHKQA
EDAHKRLELSWHRGQAARLAAELSPGEPCPVCGSVEHPEPAQGEFDLPSDDALAEAKQQE
LDALNQLHQARSDFKLLKQSLQTQQQSAEQLQQELGQAADLSLEQLQTRLIELNEAFEKA
KAAQASLVQLETQLEISEQQGRELQTGLDEARAHYGKLAEQQASDKGQYQQISAAIPKEF
SDAAAVSQAIAELGASLTGLKSRQQSIRANHAKAEQDKAAAQASLDAASARVVEVSAAAE
QERQRFEQALEASEFDSVAAFEQASLSESEQAELAQQIKAFEQAQITHQANLAQLTQVLA
DCEMPNIAQLEQHKVDAEQAMQTALGLWQTISGRARQLAQTQEQLKALDTKAQALEQQYA
VVGTLADVANGNTGNKLSLQRFVLSVLLDDVLLEASHRLQLMSKGRYRLLRKEERAKGNK
ASGLELEVEDAYTAKVRAVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSAGRMVGVISHVTEMKEQIASRIDIHKSANGSEIKLVLP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagaccactgcgactgaccatgaccgcctttggccccttcgccgatgagcagaccatt
gattttaatgccctgggcagcaatccgctatttttgatcaacggcccgaccggcgccggt
aaaacgacgattcttgatgccatctgtttcgcgctttacggcaagacgacgggagatgag
cgtgaaggcacccagatgcgctgcgacatggccgatagccagcgtctgactcaggtaagc
ttcgagtttgagcttggcactaaccgttatctgatccgccgtgttcctgaacagtccaga
gccaagaagagtggcgatggggtgacgcagcaaaagagcgaggcgcagctgagtcaattc
gatgccgatggcaaggagaccctgctggtggcggctaaggtgtccgatgctactgcgcag
atagagcaactcacggggctggatgtggatcagtttcgtcaggtgatggtgctgccccaa
ggtaaatttcgtgagctgctgatggccgactctaaggccagagagaaaatttttagccag
ctgtttcagactcacatctaccgcagaatcgaagataagcttaagcagcaggcggcgggg
atccgcaaagaggtggaggcgatgcgcaatcgccgctcgggcatattggaaggcgccgag
cttgagtctgatcaggcactgcttgacgaacaaacgcgcctcgcccccgagttgcaaaag
gccgagtcggataaacttgcccgagaaaaggcgctgcttgaggccaatcaacaactggat
aaggggatgaaactccaggctgattttaatcgcttgcaggccttgcaacaggagggcgaa
gagcttaaaacccgccaggctgaggccactttgtggcaacagcgtctgcaagcggcgcag
cgggcaaataacttaagccctctatatcaggcgatgcaatcacgtttgggtgagcaacag
gcggcgactaagctgcgtgacgagcgccagcagacgctgcagactgccctgcaggcattg
gcgcagagtcagcaagccttcgaacagctcggtgagcttgaagcgcaacagttgagtcaa
cagcagaggctgactcaactcgaggcgctagcgccgcagctggagcagctaactcagttg
agtcagcgtctgaccgagcttcagggcaaaatgctggcggccgaaaccagtggtaagcag
agcgcacagcaacttgaagcgctcaagcaggcgcgccaggagatgcttgggcggcgcgag
ttgcttaaacgagaggccgagccgcagctcagtctgcaacaatctctcaatgatgcccga
atccagcttaaggtatttgagcgctggcaacagcagcaacatgaggtagcggccattgga
cataagctggaggcggcaaaggccgcaggcagtgaactggccggcaagcataagcaggct
gaagatgcccataaacgcctggagcttagctggcatcgcggtcaggcggcgcgtctcgcc
gccgagttatcgccaggtgaaccttgcccggtttgcggcagtgttgagcatcctgagccc
gctcagggcgagtttgatttaccatcggatgatgcgctggccgaggccaaacaacaggag
ttggacgcgctgaatcagctgcatcaggcgcgcagtgactttaaactgctcaagcagtcg
ctacagacccagcagcagagcgcggagcaattgcagcaggagcttgggcaggcggccgat
ttgtcccttgagcaactgcaaacgcggcttatcgaactcaatgaggccttcgagaaggcc
aaggcggcgcaagcatcgcttgttcagttagagactcagcttgagatcagcgagcagcag
ggacgagagttacagacaggcctggatgaggcgcgcgctcattatggcaagctggccgag
caacaggccagtgacaagggacaatatcagcagattagcgcggccattccgaaagaattt
agcgacgcggcggcagtaagtcaggccattgcagagctgggcgctagcctcaccgggctt
aaatcgcgccagcagtcgataagggcgaatcacgccaaggctgaacaggacaaggccgcc
gcgcaggcctcactcgatgccgccagtgctcgtgttgtggaggttagtgctgctgccgag
caggagcgccagcgtttcgaacaggcgcttgaggcttccgaatttgatagcgttgctgca
tttgaacaggccagtttgagtgagtctgagcaggccgaactggcgcagcagatcaaggct
ttcgagcaggcacagatcacccatcaggctaacctggcgcagttaactcaggtgctcgca
gattgcgagatgccaaatattgctcagctagagcagcataaggtggacgccgagcaggcg
atgcaaaccgccttggggctttggcagacgataagtggcagagcgcgccaattggcccag
actcaagagcagctcaaggcgcttgataccaaggcccaggcgctcgagcagcaatatgcc
gtagtgggtacattggccgatgtggccaacggcaatacgggcaacaagctcagcctgcaa
cgtttcgtgctcagtgtgctgctcgacgatgtcttgctggaggccagccatagattgcag
ctaatgagtaaggggcgttatcgactgctacgtaaggaggagcgtgccaagggcaacaag
gcttctgggctggagttagaagtagaggatgcctacacggccaaggtacgcgccgtggcg
accctaagcggtggtgagagctttatggcggccttgtcgatggcgctgggattgtcggat
gtggttcaggcctacgcgggtgggattaaactcgataccctgtttatcgacgaaggtttt
ggcagcctggatcaggactcgctggagctggctatcagaaccttgatggatttgcagtcg
gcggggcgtatggttggggtgatctcccatgtgaccgagatgaaggagcagatcgccagt
cgcatcgatattcataaaagtgccaatggtagcgagattaaattagttttaccttaa
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integrated database retrieval system
