Sphingopyxis macrogoltabida 203: LH19_02630
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Entry
LH19_02630 CDS
T04627
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz00300
Lysine biosynthesis
smaz00470
D-Amino acid metabolism
smaz01100
Metabolic pathways
smaz01110
Biosynthesis of secondary metabolites
smaz01120
Microbial metabolism in diverse environments
smaz01230
Biosynthesis of amino acids
Module
smaz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LH19_02630
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LH19_02630
Enzymes [BR:
smaz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LH19_02630
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALJ11753
UniProt:
A0A0P0DD96
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All DBs
Position
507646..508905
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AA seq
419 aa
AA seq
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MDHFDYRDGVLHAENIPLPRIAEEIGTPVYVYSRATLERHAQVFRDALSDIPKKHIAFAI
KCNPNLGVLRVLARQGYGADVVSGGELERALAAGMAPEDIVFSGVGKTRAELALGLDRGI
GQFNIEHEPEGVALAEIALGKEMTARAVLRVNPDVDAGTHAKISTGKAENKFGVGIDSAP
EIFGRLAALPGLQMRGIALHIGSQLTSLDPLEAAFERVGRLVADLRAAGHSITHVDLGGG
LGVPYRPEDNPPSPAEYGAMVARVTKDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGATN
PFVIVDAAMNDLARPALYDAYHDFVAVQPGGEKMTASIVGPVCETGDTFARDRVTDKVEA
GDLAVFRTAGAYGATMASTYNSRSLVPEVLVDGDRYVVVADRIAAGTIMAAERVPDWID
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttgactatcgtgacggcgtcctccacgccgaaaacattcccttgccgcgc
atcgccgaggaaatcggcacccccgtctatgtctattcgcgcgcgacgctcgaacgccat
gcgcaggtgttccgcgacgcgctgagcgatattccgaagaagcacatcgccttcgcgatc
aagtgcaaccccaacctcggcgtgctgcgcgtcctcgcgcggcagggctatggcgccgac
gtcgtctcgggcggcgagctcgaacgcgcgctggcggcgggcatggcgcccgaagacatc
gtcttttcgggcgtcggcaagacgcgcgccgaactggcgctcggactcgatcgcggcatc
ggccagttcaacatcgaacatgaacccgaaggcgtcgcgcttgccgagattgcgcttggc
aaggagatgactgcgcgcgccgtgctacgcgtcaaccccgacgtcgatgcgggcacgcat
gcgaaaatttcgaccggcaaggccgaaaacaagttcggcgtcggcatcgacagcgcgccc
gaaatattcgggcgtctggcagcgctgccggggctgcaaatgcgcggtatcgcactgcat
atcggcagccagctcaccagcctcgacccgctcgaggcggcgttcgaacgcgtcggtcgt
ctcgtcgccgacctccgcgccgcggggcacagcatcacccatgtcgaccttggcggcggg
cttggcgtgccgtatcggcccgaggacaatccgccgtcgcccgccgaatatggcgcgatg
gtcgcgcgggtaacaaaggattgggacgtcacgctgatgttcgaacccggccgggtgatc
gcgggtaacactggcgtgctgcttaccgaggtgctgtgggtcaagccgggcgcgaccaat
ccgtttgtgatcgtcgacgcagcgatgaacgaccttgcgcgtccggcgctttacgacgcc
tatcatgatttcgttgccgtgcagccgggcggcgagaagatgaccgcgtcgatcgtcggc
ccggtgtgcgaaacgggcgataccttcgcgcgcgaccgcgtgaccgacaaggtcgaggcg
ggcgaccttgccgtcttccgcaccgcgggcgcctatggcgcgacgatggcgtcgacctat
aacagccgcagcctcgttcccgaggtgctcgtcgatggcgaccgctatgtcgtcgtcgcc
gaccgcatcgccgcggggacgatcatggccgccgagcgcgtgcccgactggatcgactga
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