Sinorhizobium medicae: Smed_2804
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Entry
Smed_2804 CDS
T00555
Name
(GenBank) ATP dependent DNA ligase
Organism
smd
Sinorhizobium medicae
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
ABR61634
UniProt:
A6UDA4
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Position
2926730..2928343
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AA seq
537 aa
AA seq
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MKAFAELLDRLVLTPQRNAKIRLLVDYFHSAPDPSRGYALAAIAGTLSLNTVKPALIRDL
LLERMDGVLFQYSYDYVGDLAETVSLAWEPPAEVAPEDIPLGEVVERLQKAGRSEVRSLV
REMLDRLDTSGRFALLKLATGGLRIGVSARLAKQALAEMGSREVTEIETLWHGLEPPYRP
LFLWLTGEGEMPLLKTPAIFHSVMLATAVGEGELDGLDPSDYAAEWKWDGIRVQLANVGG
VRRLYSRSGDEISSAFPEIIEVAGIDGVIDGELLVGGTMRSNRATGTFADLQQRLNRKTV
SRKLLDDYPAFIRAYDVLFSGERDIRPEPFHVRRGALSALIEAASPQHFDLSPLVPFSNW
KELDELRAKPPDPVIEGVMLKRLDSPYLAGRSKGPWFKWKRAPFNIDAVLMYAQRGHGKR
SSYYSDFTFGVWTEGEDGTSLVPVGKAYFGFTDAELEILDRFVRDNTVERFGPVRAVRAE
PDKGFVVEVAFEGLNRSTRHKSGVAMRFPRIARLRPDKLPRDADRLETLQAMIGPPT
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttcgccgaattgctcgaccggctggtgctgacgccgcagcgaaacgccaag
atccggctgctcgtcgattacttccacagcgcgcccgatccgagccgcggctacgcgttg
gccgcgatcgccggaacgctctcgctgaacacggtgaagcctgctctcattcgcgacctg
ctgctcgagcgtatggacggcgtactgttccagtactcctacgattatgtaggcgatctc
gcggaaacagtctctctggcctgggagccgccggcggaggtcgcccccgaggacattccg
ctcggggaagtcgtcgaacggcttcaaaaagcgggccgttccgaggtccgttcgctcgtc
cgcgagatgctggaccggctcgatacctccggccgcttcgccctcctgaagctcgcgacg
ggaggcctgcgtatcggggtctcggcacggcttgcgaaacaggcgcttgcggagatgggc
agcagggaggtgacagagatcgaaacgctctggcacggcctggagccgccctaccggccg
cttttcctctggctcaccggcgagggcgaaatgccgttgctcaagacgccggcgatattt
cactcggtgatgctcgcgacagcggtgggcgaaggcgagctcgatggtctcgatccgagc
gactacgcggccgagtggaaatgggacggtatccgcgtccaactcgccaatgtcggcggg
gtccgccgtctctactctcgcagcggtgacgagatttcctccgcctttcccgaaatcatc
gaggttgccgggattgacggcgtcatcgacggcgagcttctggtcggcggaacgatgcgc
agcaaccgcgccaccggtacgttcgccgacctgcagcagaggctgaaccggaagaccgtc
agtcgcaagctcctcgatgattatccggcattcattcgcgcctatgacgtgctcttttca
ggcgagcgcgatatcaggcccgagcccttccatgtccgccgcggggccctgtcggcgctg
atcgaagcagcctcgccgcagcatttcgatctctcgccactcgtcccgttttcgaactgg
aaggagctcgacgagctacgagcgaagccgcccgaccccgtgatcgagggcgtcatgctg
aaacgtctggactcgccctatctggccggaagatccaagggcccctggttcaagtggaag
cgtgcgcccttcaatatagatgccgtgctgatgtatgcgcaacgcggccacggcaaacgt
tcaagctattattccgacttcaccttcggagtttggacggagggggaagacggaacgagc
ctcgttccggtcggcaaggcctatttcggtttcaccgatgccgagctcgagattctcgac
cgtttcgtgcgcgacaatacggtcgaacgtttcggtcccgtgcgcgcggtgcgcgccgaa
cccgacaagggtttcgtcgtcgaggtcgccttcgaaggcctcaaccgctccacccgtcac
aagtccggcgtagccatgcgctttccgcggattgcccggctcagacccgacaagctgcca
cgcgacgcggaccgactggaaacgttgcaggcgatgatcgggccgccaacttga
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