Sinorhizobium medicae: Smed_2941
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Entry
Smed_2941 CDS
T00555
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00020
Citrate cycle (TCA cycle)
smd00785
Lipoic acid metabolism
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
smd01120
Microbial metabolism in diverse environments
smd01200
Carbon metabolism
smd01210
2-Oxocarboxylic acid metabolism
Module
smd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Smed_2941
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Smed_2941
Enzymes [BR:
smd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Smed_2941
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ABR61770
UniProt:
A6UDP0
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All DBs
Position
complement(3087097..3090093)
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AA seq
998 aa
AA seq
DB search
MTRQEANEQFQLTSFLDGANAAYIEQLYARYEADPGSVSAEWQSFFKALAERPEDVVRAA
KGASWKKPNWPIPANGELVSALDGDWGTVEKVIEKKVKAKAEEASAATGVPLSEAEVHQS
TRDSVRAIMMIRAYRMRGHLHAKLDPLGLADPVEDYDELSPKTYGFEEKDYDRKIFIDNV
LGLEYATVREMVELLERTYCSTIGVEFMHISNPEEKGWIQERIEGPDKGVEFTPEGKKAI
LQKLIEAEGFEQFIDVKYKGTKRFGVDGGESLIPALEQIIKRGGQLGLKEIVLGMAHRGR
LNVLSQVMAKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQMATVFEGDIIPLRERVKVMPLILHGDAAFAGQGVVAEILG
LSGLRGHRVGGTVHFIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVVY
AAKVATEFRMKFHKPVVIDMFCYRRFGHNEGDEPAFTQPRMYKAIRSHKTVVQLYSDRLI
AEGLISDGEVEKMKADWRAHLEQEFEAGQSYKPNKADWLDGAWSGLRTADNQDEQRRGRT
SVPMKQLKEIGRKLSEIPDGFSAHRTIQRFMENRANMVQTGEGIDWAMAEALAFGTLVTE
GTKIRLSGQDCERGTFSQRHSVLYDQETEERYIPLANLAPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVVFDQFVSSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERFLQLCAEDNMQVANVTTPANYFHILRRQVKRDFRKPLILMTPKSLLRHKRA
VSSLSEMAGESSFHRLLWDDAEVIKDGPIKLQKDSKIRRVVLCSGKVYYDLLEEREKRGI
DDIYLLRVEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDA
KYQRVRYTGRPAAASPATGLMSKHLAQLAAFLEDALGG
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggcaagaggccaacgagcaatttcagctcacatcctttctggacggcgccaat
gccgcctatatcgagcagctctatgcgcgctatgaagcagatcccggatccgtttcggcc
gagtggcaatccttcttcaaggcgcttgccgagcggcccgaagatgtggtgagagcggcc
aagggcgcctcctggaagaagccgaactggccgatccccgccaatggcgaactcgtttcg
gccctcgacggcgactggggcacggtcgagaaggtcatcgaaaagaaggtcaaggccaag
gcggaggaagcctccgccgcaaccggcgtcccgctcagcgaagccgaggtgcatcagtcg
acgcgcgattccgtccgcgccatcatgatgatccgcgcctatcgcatgcgcggccacctg
catgccaagctcgacccgctcggcctggccgatcccgtcgaggattacgacgaactctcc
ccgaagacctacggcttcgaagagaaggactacgaccgcaagatcttcatcgacaacgtg
ctcggcctcgaatatgcgaccgtgcgcgagatggtcgagctgctcgagcggacctattgt
tcgacgatcggcgtcgaattcatgcatatctccaacccggaagagaagggctggatacag
gaacgcatcgaaggtccggacaagggcgtcgaattcaccccagagggcaagaaggcgatc
ctgcagaagctcatcgaagcggagggcttcgagcagttcatcgacgtcaagtacaagggc
accaagcgtttcggcgttgatggcggcgaatccctgatccccgcgctcgagcagatcatc
aagcgcggcggccagctcggcctgaaggagatcgtcctgggtatggcgcatcgcggccgt
ctcaacgttctctcccaggtcatggccaagccgcaccgcgccatcttccacgagttcaag
ggcgggtcctacacgcccgacgatgtggaaggctccggcgacgtcaagtatcacctcggc
gcttcctccgaccgcgaattcgacggcaacaaggtccacctgtcgctgaccgcaaacccg
tcccatctcgaaatcgtcaatccggtcgtcatgggcaaggcgcgcgccaagcaggatcag
atggcgaccgtattcgaaggcgacatcataccgctgcgcgaacgcgtcaaggtcatgccg
ttgatcctgcacggcgacgcggcctttgccggccagggtgtggtcgccgagattctcggc
ctatcgggcctgcgcgggcatcgtgtcggcggcaccgtccacttcatcatcaacaaccag
atcggcttcaccacgaacccggccttctcccgttcctcgccctatccgtccgacgtggcg
aagatgatagaagcgcccatcttccacgtgaacggcgacgatccggaagcggtggtctat
gccgccaaggtcgcgaccgaattccggatgaagttccacaagcctgtcgtcatcgacatg
ttctgctaccggcggttcggtcacaatgagggcgacgagccggccttcacgcagccgagg
atgtacaaggccatccgctcgcacaagacggtcgtccagctctattcggaccggctgatt
gccgagggcctgatcagcgacggcgaagtcgagaagatgaaggccgactggcgcgcccat
ctcgaacaggaattcgaggccggccagtcctacaagccgaacaaggccgactggctcgac
ggtgcctggtcgggtctgcgcacggccgacaaccaggatgagcagcggcgcgggcggacc
tcggtccctatgaagcagctgaaggaaatcggccgtaagctttccgaaatcccggacggc
ttcagcgcgcatcgcaccatccagcgcttcatggagaaccgcgccaacatggtccagacc
ggcgagggcatcgactgggcgatggcggaagcgctcgccttcggtacgctcgtgacggag
ggcaccaagattcgcctttccggccaggattgcgagcgcggcaccttctcgcaacgccat
tcggttctctacgatcaggagaccgaggagcgctacattccgcttgccaacctggcaccg
acgcaggctcgatacgaggtcatcaactcgatgctctccgaagaggcagtgctcggcttc
gagtacggctattcgctcgcccgcccgaacgcgctgacactgtgggaagcccagttcggc
gacttcgccaatggcgcacaggtggttttcgaccagttcgtctcgtcgggcgagcgcaag
tggctgcgcatgtcgggtctcgtctgcctgctgccgcacggctatgaggggcagggaccg
gagcattcctccgcccgcctcgagcgcttccttcagctttgcgcggaagacaacatgcag
gtcgccaacgttacgaccccggcgaactactttcatattctgcgccggcaggtaaagcgc
gacttccgcaagccgctgatcctgatgactccgaagtcgcttctgcgtcacaagagggcg
gtctccagcctgtcggaaatggccggcgagagctcgttccatcgtctcctttgggacgat
gcagaggtcatcaaggacgggccgatcaagctgcagaaggattcgaagatccgccgcgtg
gtcctgtgctcgggcaaggtctattacgatctgctggaagagcgcgagaagcgcgggata
gacgacatctacctgctgcgcgtcgaacagctctatccgttcccggcaaaggcgctgatc
aacgaactcagccgcttccgcaatgcggagatggtctggtgccaggaagagccgaagaac
atgggcgcctggtcgttcatcgatccctatctagaatgggtacttgcccatatcgatgcc
aagtaccagcgggtgcgctataccggccgtcctgccgccgcttcgccggctaccggcctg
atgtccaagcatctggcgcagcttgccgccttcctcgaggacgcgctggggggctga
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