Sinorhizobium medicae: Smed_2978
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Entry
Smed_2978 CDS
T00555
Name
(GenBank) GntR domain protein
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smd03000
]
Smed_2978
Transcription factors [BR:
smd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Smed_2978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_36
HTH_41
HTH_IclR
HTH_11
MarR_2
LexA_DNA_bind
Rrf2
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
ABR61807
UniProt:
A6UDS7
LinkDB
All DBs
Position
complement(3126291..3126980)
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AA seq
229 aa
AA seq
DB search
MLSKTLVPQSVAREIQTMINSGTLKAGEKIPSQREFSQKFGISRASLREALLTLETLGLL
KTEPGRGTFVAEAQGRPSGDMAPWRYSDSYSVFDVFQTRIMLEGEIARLSAGRLTQIQLE
RMERATRTMEECWANQDLLANVEADLEFHGVIVSACSNAMLRALYQTVRDQLTETQRQPI
PHTDPERMKASISEHRRIIAALAANDGLGARHEMETHIRNTAQCAGLAP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcaagacactcgttccgcaatcggtcgcacgcgaaattcagaccatgatcaac
agcggaacattgaaggcgggggaaaagattccctcccagcgggagttctcgcagaagttc
ggcatcagccgcgcttctctgcgggaagcccttctgaccctggaaacgcttggtctgctg
aagacggagccgggccgtggcactttcgtcgccgaggcgcagggccggccctccggtgac
atggcgccgtggcgttactccgacagctattccgtattcgatgtatttcagacccggatc
atgcttgaaggcgaaatcgcacggctttccgccggacgcctcacacaaatccagctcgaa
aggatggaaagggcgacccgtacgatggaggagtgctgggccaatcaggacctcctggcg
aatgtggaggcggacctggagttccatggggtcatcgtttccgcctgctcgaacgcgatg
ctgcgcgcgctctatcagaccgtacgtgaccagcttaccgagacccaacgtcaaccaatc
cctcacacggatccagagcggatgaaggcttcgatttcagagcaccggcgtatcatcgcc
gcgcttgcggccaatgacgggcttggcgccaggcatgaaatggagacgcatatccgcaac
accgcgcagtgtgcggggctcgcgccctga
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integrated database retrieval system
