Sinorhizobium medicae: Smed_3837
Help
Entry
Smed_3837 CDS
T00555
Name
(GenBank) GntR domain protein
KO
K22104
GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smd03000
]
Smed_3837
Transcription factors [BR:
smd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Smed_3837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
TrmB
HTH_5
HTH_Crp_2
HTH_36
Fe_dep_repress
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
ABR62649
UniProt:
A6UG69
LinkDB
All DBs
Position
pSMED01:complement(292628..293329)
Genome browser
AA seq
233 aa
AA seq
DB search
MSTLAVRKKLSDEVRLKLEEMIRDEIYPLDSTLPSERDLMELFGVGRPSIREALYALERM
GLVKISTGERAKVTRPTPDHFLTSLAGAARMLLGRPEGVANFEQARLFLEEGCARHLAAY
ATAEQIAAIDAALARNEAAIGKARAFAATDVAFHRTLTQMVSNPIFVAVHDAFVDWLIGQ
RPLPTKPEISNRESFDEHVAIVEAIRARDPEHAGRVMREHLESAARKYRQTNP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagcacactcgcagtccgcaagaagctttctgatgaagtccggttgaagctggaggag
atgatccgcgacgagatctatcctctcgattccacccttccctccgagcgggatctgatg
gagctgttcggcgtcgggcgcccctcgatccgcgaagcgctgtatgcgctggagcgcatg
gggctcgtgaagatcagcaccggcgagcgcgccaaagtcacgcgcccgacgccggaccat
ttcctgacttcgcttgcgggtgctgcgcgcatgcttctcggacgcccggagggtgtggcg
aacttcgaacaggcgcgcttgtttctcgaggagggctgcgcgcggcatctggcggcgtat
gccacggcggagcagattgcggcgatcgacgcggcgcttgctcgcaacgaggctgcgatc
ggcaaggctcgcgcctttgccgcaaccgacgtcgccttccaccgcacgctgacccagatg
gtttcgaacccgattttcgtcgcggtacacgacgcgtttgtcgactggctgatcggccaa
aggccgctgccgaccaaaccggagatttcgaacagagagagtttcgacgagcacgtggcg
atcgtggaggcgatccgagcacgcgatccggagcatgccggacgtgtcatgcgtgagcac
ctggagagtgccgcgcgcaaatacaggcaaacgaacccttag
DBGET
integrated database retrieval system
